Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00671 ATGCTTTCCTCCGTTTCTTTTCCTTCTTCTCTCTACGCCGCAAACTTCGCCGGCAACGCCGTCGCTCCTCCACCTTGCCGAGTTAGATCTCGGCCAATAGTTTCCGCCGCTGGTGCTACAGCCACCACTGAAGCTCGTTCTACATGGACGGAGCAACCTAGACCTTCCTATCTCAACATGAACTCTTCTCCTTCATCGTTCTACGAGATCCTCGGTGTACCGGCCGGTGCTTCGATCAAAGAGATCAAGACGGCGTACCGGCGACTTGCTAGAGTCTGCCACCCTGATGTGGCGGCGATTGACCGGAAAAACTCGTCGGCGGACGATTTCATGAAAATTCACGCTGCTTATTCTACGCTATCGGATCCTGATAAACGCGCTAATTATGACCGGAGTATTTTCCGGCGACATCGGCCGTTGTCGACGGTGATGTCCGGTTACTCGAGCCGGAAATGGGAAACGGACCAGTGCTGGTAG 477 0.5388 MLSSVSFPSSLYAANFAGNAVAPPPCRVRSRPIVSAAGATATTEARSTWTEQPRPSYLNMNSSPSSFYEILGVPAGASIKEIKTAYRRLARVCHPDVAAIDRKNSSADDFMKIHAAYSTLSDPDKRANYDRSIFRRHRPLSTVMSGYSSRKWETDQCW 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00671 158 PANTHER - 1 158 - -
Car08g00671 158 SUPERFAMILY Chaperone J-domain 64 134 IPR036869 -
Car08g00671 158 Gene3D DnaJ domain 55 146 IPR036869 -
Car08g00671 158 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 158 - -
Car08g00671 158 MobiDBLite consensus disorder prediction 37 56 - -
Car08g00671 158 PRINTS DnaJ domain signature 68 86 IPR001623 -
Car08g00671 158 PRINTS DnaJ domain signature 86 101 IPR001623 -
Car08g00671 158 PRINTS DnaJ domain signature 105 125 IPR001623 -
Car08g00671 158 ProSiteProfiles dnaJ domain profile. 66 133 IPR001623 -
Car08g00671 158 Pfam DnaJ domain 67 130 IPR001623 -
Car08g00671 158 SMART dnaj_3 65 125 IPR001623 -
Car08g00671 158 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Car08g00671 158 CDD DnaJ 67 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00671 Car-Chr8 5847193 5848096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00671 68 130 C2H2 Transcription Factor Family AT1G74250 41.791 6.89e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00671 - - gmx:100800959 255.373