Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00669 ATGGGTATATGTTTCTCTTCAACAAAGGTTGTTAGCGGCTCTAACAGTAACGCAACAAACACGGAGAACCGTAAACGGAATTCAACTGCGACGGAAACTGTTACTGTCGTCACGGGCCAAAAACATCAGGTACCGAGCTCTGCTCCGCGACGTAGAAGCCCAGATGAGGCCCAAAATAAAAAACAGCAGAGTCAGAATCATCATCAGCAACACAGGCCCAAAGAGAAAGTTGGTTCGCGGCATGTTCCGTGTGGGAAACGAACGGATTTCGGTTATGAGAAAGATTTTGATAAGAGATTTTCGCTAGGGAAATTATTGGGGCATGGACAATTTGGTTATACCTATGTTGGAATTGATAAATCTAATGGAGATCGTGTTGCTGTTAAGAGACTCGAGAAAGCAAAGATGGTTCTCCCCATAGCTGTTGAGGATGTAAAGAGAGAGGTCAAGATATTGAAAGAACTTACAGGCCATGAAAATGTGGTTCAATTCTATAATGCTTTTGACGATGAATCATATGTGTACATAGTTATGGAGTTATGCGAAGGTGGAGAATTGCTAGACAGGATATTGGCCAAGAAGGACAGCCGTTACACTGAAAAAGATGCTGCAGTGGTTGTAAGGCAGATGCTGAAGGTTGCAGCTGAGTGTCATTTACATGGTTTGGTACATCGCGACATGAAGCCAGAGAATTTTCTTTTCAAATCAAACAAGGAAGATTCAGCTTTAAAGGCTACTGATTTTGGTTTGTCTGATTTCATAAAACCTGGTAAGAGGTTTCAAGATATTGTTGGAAGTGCATACTACGTCGCACCAGAAGTGTTAAAGCGGAAGTCAGGTCCTGAATCAGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTGTGGGAAACGACCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTAAGGAACAAGCCTGATTTCCGGCGGAAACCGTGGCCAACTATAAGTAATGCAGCAAAAGATTTTGTGAAGAAATTGTTGGTAAAAGATCCTCGTGCAAGATTAACTGCTGCTCAGGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAGGCATCCGAAATTCCAATTGATATATCTGTCCTGAACAACATGCGACAGTTTGTGAAGTATAGTCGATTGAAACAATTTGCATTGAGGGCATTGGCTAGCACACTTAATGAAGGTGAGTTGTCTGATCTAAAAGATCAGTTTGATGCAATAGATGTCGACAAAAATGGTGCTATTAGTCTTGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCTTGGAAGTTGAAAGAATCCAGAGTATTAGAGATATTGCAAGCGATAGACAGCAATACAGATGGATTAGTAGATTTCACTGAGTTTGTAGCAGCTACATTACACGTGCATCAATTGGAGGAACATGACTCTGACAAGTGGCAGCAACGGTCACAGGCTGCTTTTGAGAAATTTGACTTAGATAAAGATGGCTTTATTACTCCAGAGGAACTAAGAATGGTTAGTCTGATGTCTTTCCCAATCTCCCTGAACATCTTTTATGATAAACTCTCTCCCTAG 1587 0.4152 MGICFSSTKVVSGSNSNATNTENRKRNSTATETVTVVTGQKHQVPSSAPRRRSPDEAQNKKQQSQNHHQQHRPKEKVGSRHVPCGKRTDFGYEKDFDKRFSLGKLLGHGQFGYTYVGIDKSNGDRVAVKRLEKAKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFDDESYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSNKEDSALKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGKRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAAQALSHPWVREGGEASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLNEGELSDLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSDKWQQRSQAAFEKFDLDKDGFITPEELRMVSLMSFPISLNIFYDKLSP 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00669 528 MobiDBLite consensus disorder prediction 1 47 - -
Car08g00669 528 SUPERFAMILY EF-hand 392 510 IPR011992 -
Car08g00669 528 CDD STKc_CAMK 99 359 - -
Car08g00669 528 ProSiteProfiles EF-hand calcium-binding domain profile. 482 517 IPR002048 GO:0005509
Car08g00669 528 MobiDBLite consensus disorder prediction 1 85 - -
Car08g00669 528 ProSiteProfiles EF-hand calcium-binding domain profile. 403 438 IPR002048 GO:0005509
Car08g00669 528 SUPERFAMILY Protein kinase-like (PK-like) 97 371 IPR011009 -
Car08g00669 528 Gene3D Transferase(Phosphotransferase) domain 1 186 367 - -
Car08g00669 528 ProSiteProfiles EF-hand calcium-binding domain profile. 440 475 IPR002048 GO:0005509
Car08g00669 528 Gene3D Phosphorylase Kinase; domain 1 93 185 - -
Car08g00669 528 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 510 - -
Car08g00669 528 Pfam Protein kinase domain 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00669 528 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 20 510 - -
Car08g00669 528 Gene3D - 377 510 - -
Car08g00669 528 Gene3D - 401 470 - -
Car08g00669 528 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Car08g00669 528 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
Car08g00669 528 ProSiteProfiles Protein kinase domain profile. 100 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00669 528 Pfam EF hand 489 510 IPR002048 GO:0005509
Car08g00669 528 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Car08g00669 528 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
Car08g00669 528 Pfam EF-hand domain pair 406 469 IPR002048 GO:0005509
Car08g00669 528 SMART efh_1 407 435 IPR002048 GO:0005509
Car08g00669 528 SMART efh_1 444 472 IPR002048 GO:0005509
Car08g00669 528 SMART efh_1 486 514 IPR002048 GO:0005509
Car08g00669 528 MobiDBLite consensus disorder prediction 53 85 - -
Car08g00669 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Car08g00669 528 SMART serkin_6 100 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00669 Car-Chr8 5828231 5834137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00669 1 509 EF-hand Containing Proteins AT2G17890 75.908 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car08g00669 Pkinase 5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00669 K13412 - gmx:100805954 876.7