Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00656 ATGATGGAGTCCATGGAGTCATGTGTCCCACCAGGGTTTCGATTCCACCCAACTGATGAAGAACTTGTTGGTTATTATCTCAGAAAGAAAGTTGCTTCTCAGAAAATTGACCTTGATGTTATCCGAGAGATCGATCTTTATCGTATCGAACCATGGGATCTTCAAGAGAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTTTTCAGCCACAAAGATAAAAAGTATCCAACAGGGACAAGAACTAACAGAGCTACTATGGCTGGGTTTTGGAAAGCAACAGGAAGAGATAAAGCAGTTTATGACAAGATGAAATTAATTGGAATGAGAAAGACACTTGTTTTCTACAAAGGAAGAGCACCTAATGGACAGAAATCTGATTGGATCATGCATGAGTATAGGCTTGAATCTGATGAAAATGGACCTCCACAGGAGGAAGGATGGGTTGTGTGTAGAGCATTTAAGAAAAGAGCAACCAATAGCCAAACAAAAAACACTATTGAAAGATGGGACACAAGCTACTTCTATGAAGAAGCAAGTGGAATGAGTTCCATGGTGGATCCAATTGATCTAATCTCAAGGCAACCTCAAAGCTTTTTAGCTCaaagtttcaatatgtgtaagcaagagatagaagcagaaaataacaacaaCAACAACAGCTTGATAAGTTGCATGCATGCAGACCAATTTATACAGCTTCCTCAGCTTGAGAGTCCTTCATTGCCATTAGTAAAGAGACCAAGCATAGTGTCTCTAGTATCAGAGAataatgatgataataatgatgatgatCAAAAGAGGTTATTATTATTATCAAACAACAATGTTACTACTATTACTACTACtaataataataataataataataataacaataatCAAGTTACTACTGATTGGAGAGCTCTTGATAAGTTTGTGGCTTCTCAACTAAGTCATGAAGATGAAGGAGTGTTGTCAAGCTTTGGAACAAATATTCTTCTTCCTAACTCAGATATGGCATTGATGTTAATGCAAGGTAGTAGGGATGAAGGGAACAAGTTCTTAAATGCAAGCTCAGACTGTGATATTGGGATATGCGTATTTGAAAAATGA 1101 0.3515 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKMKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKRATNSQTKNTIERWDTSYFYEEASGMSSMVDPIDLISRQPQSFLAQSFNMCKQEIEAENNNNNNSLISCMHADQFIQLPQLESPSLPLVKRPSIVSLVSENNDDNNDDDQKRLLLLSNNNVTTITTTNNNNNNNNNNNQVTTDWRALDKFVASQLSHEDEGVLSSFGTNILLPNSDMALMLMQGSRDEGNKFLNASSDCDIGICVFEK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00656 366 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Car08g00656 366 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Car08g00656 366 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Car08g00656 366 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Car08g00656 366 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 344 - -
Car08g00656 366 PANTHER - 7 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00656 Car-Chr8 5662841 5667011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00656 2 365 NAC Transcription Factor Family AT2G18060 63.395 1.28e-159 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car08g00656 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00656 - - aprc:113869508 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00656 08 5662841 5667011 Car07g01597 07 15995531 15999606 PCT