Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00654 ATGCATACGCTTCTTCTCATTTTGGTACTCTGCGCACCGTTCTTATCCTACGCCGATCCTAGCGCTGTAACCGTCTCAGAGATCCAAGCCTTAACGTCGTTTAAGCTCAACCTCCATGATCCTGTCGGAGCTCTCGACGGTTGGGATCCATCCTCGCCGGAAGCCCCGTGTGACTGGCGCGGCGTTGCTTGCAATAACGACCGAGTCACGGAGCTTCGTTTGCCTCGTCTTCAACTCGGTGGTAGACTCAGTGAGCGTCTTTCGGAGTTGCGCATGCTTCGCAAGATAAGCCTCCGTTCGAACTTCTTCAATGGAACCATTCCTTCGTCGCTTACCAAATGTAAGCTTCTACGCTTTGTGTTCTTACAGGATAATGCATTTTCCGGTAAACTTCCGGCGGAGGTTGGAAACCTCACCGGTCTTCAGATTTTCAACGTTGCACAGAACAACCTCTCTGGCACCGTTCCAAGCGAGCTTCCTCTTAGTCTCAAATATCTCGACCTATCGTCGAACGCTTTCTCCGGCGAGATTCCGAGTACCGTTGGTAATCTATCTCTTCTTCAACTTATCAACCTCTCGTACAATCAATTCTCCGGCGAGATTCCGGCTACGTTCGGGGAGCTTCAACAACTGCAATATCTCTGGCTTGACCACAACTTCCTTGAAGGAACCCTACCTTCGGCGCTTGCTAATTGCTCTTCGCTCGTGCATCTGAGCGCGGATGGAAACTCACTCGGCGGCGTGGTATCTCTTTCTCAGAACAATCTTACTGGTTCGATTCCTTCTTCCGTTGTCTGCAATGTTTCGGTCCACGCGCCGTCTCTGAGGATAGTTCAACTTGGATTCAATGGTTTCACGGATTTTGTTGGCCACGAAACCAACACGTGTTTTAGTGTTCTTCAGGTTTTGGATATTCAACACAATGGCATAAAGGGCACGTTTCCCTTGTGGTTAACCAATGTAACCACGCTATCAGTGCTTGATCTTTCGAACAATGCACTTTCCGGTGAGATTCCTCCGCAGATAGGAAAGCTCGCTGCATTGACGGAGTTGAAGATTGCTGATAATTCATTCTCAGGTGTCATTCCGGTGGAAATCAAGAAATGTGGGTCCCTTGGTGTTGTTGATTTTGAAGGCAACGAATTTGGAGGAGAAGTTCCTTCATTTTTCGGCGAGATGAAGGGACTCAAGGTTCTATCTCTTGGTGGAAATAGTTTCTTTGGTTCAGTTCCTGTGAGTTTTGGTAACCTTTCTATTCTTGAAACTTTGAGTTTGAGAAGCAATAGGTTAAATGGAAGTATGCCTGATATGATAATGAGAATGAGCAATTTGACAACACTAGACCTTAGTGAAAACAAGTTTACTGGTGAAATTCATGATAGTATTGCCAATTTGAATCGATTAATAGTTCTTAATTTGAGTGGCAATGGCTTCTCTGGAAAAATCCCTTCTAGTTTGGGAAATCTTTTCAGGCTAACTACACTTGATTTGAGCAAACAGAATCTCTCTGGAGAGTTACCATTTGAGCTCTCAGGACTGCCCAATCTGCAGGTTATTGCTATGCAGGAGAATAAATTATCTGGGGTAGTGCCTGAAGGGTTTAGCAGTTTGACGAGTTTGCAATATGTGAATCTCAGCTCTAATGCTTTTTCTGGTCATATTCCTGAGAACTATGGTTTTCTTCGATCGTTGGTTGTCCTTTCATTGTCTCATAATCACATTACAGGAACTATTCCTTCAGAGATTGGAAACTGCTCTGATATTGAAATTATTGAGCTTGGAGCAAATTCATTGGCAGGTCATATCCCCACTGATCTCTCTCGCCTTGCCCATTTGAGAGTGCTTGATTTGGGTGGTAACAATTTAACCGGGGATATGCCTGAGGATATCTCCAAATGTTCGTCTTTAACCACATTGTTGGTAGATCACAACCGTCTTTCGGGTGCCATACCAGGGTCGTTGTCAGTTTTATCAAAGCTAACAATGCTGGATCTCTCTGCTAACAATTTGAGTGGGGAAATTCCTAGTAATTTTTCTATGATCTCTGGTTTGGTGTACTTCAATGTCTCGGAGAACAATTTAGAAGGTGAGATACCGCAAACTTTGGCGTCACGGTTCAACAACCCTTCTGTATTTGCTGATAATCAGGGTTTATGTGGGAAGCCATTAGAATCAAGGTGTGAAGGAATAGACAACAGGGACAAAAAGAGGTTGGTTGTGTTGATTATCATCATTGCAATAGGAGCTAGTGTATTAGTCCTGTTTTGCTGTTTTTACGTCTTTAGCCTGTGGAGATGGCGCAAGAAGCTCAAAGAAAGGGTCTGTGGGGAGAAGAAAAGGAGCCCTGCAAGAGCAAGTTCAGGAGCAAGTGGAGGCCGTGGTAGCAGTGAAAATGGTGGTCCAAAACTCGTGATGTTCAACACCAAAGTCACACTTGCCGAAACAATTGAAGCAACGAGGCAATTCGACGAAGAAAATGTACTAAGCAGAACAAGGTTTGGATTAGTATTCAAGGCCTGCTACAACGATGGAATGGTCCTTTCCATTCGCAGGCTCCCGGATGGATCATTAGATGAGAACATGTTCAGAAAAGAAGCTGAATCACTAGGCAAAATAAAACACCGAAATTTAACGGTTCTCAGAGGTTACTATGCAGGACCACCTGATATGAGACTCTTGGCCTATGATTACATGCCCAATGGAAACCTTGCAACACTCCTCCAAGAAGCTTCTCACCAAGATGGCCATGTTCTAAATTGGCCAATGCGACACCTCATTGCACTAGGAATTGCCCGTGGATTAGCCTTCATACACCAATCCACAATGGTTCACGGCGATGTGAAACCTCAAAACGTTTTATTCGACGCAGATTTCGAAGCCCATTTATCAGATTTTGGGTTAGAAAGGCTAACAGTAGCCACTCAAGGAGAAGCAGCCTCCACTTCAACTTCAGTTGGCACTTTGGGTTATGTTTCTCCAGAAGCAATCTTAACCGGAGAAACCACTAGGGAGTCTGATGTTTACAGCTTTGGCATTGTGTTGTTGGAACTTCTGACCGGAAAAAGACCAATGATGTTCACACAGGATGAAGACATTGTGAAATGGGTGAAAAAACAACTGCAGAGGGGTCAAATAACAGAGCTATTAGAACCTGGTTTACTTGAATTGGACCCAGAATCATCAGAGTGGGAAGAGTTTTTACTAGGTGTGAAAGTTGGGTTACTTTGCACAGCACCAGACCCTCTTGATCGACCAACCATGTCCGACATTGTTTTCATGCTCGAAGGTTGTCGTGTTGGTCCCGATATCCCATCTTCAGCGGATCCCACCTCTCAACATTCCCCGGCATAA 3351 0.4476 MHTLLLILVLCAPFLSYADPSAVTVSEIQALTSFKLNLHDPVGALDGWDPSSPEAPCDWRGVACNNDRVTELRLPRLQLGGRLSERLSELRMLRKISLRSNFFNGTIPSSLTKCKLLRFVFLQDNAFSGKLPAEVGNLTGLQIFNVAQNNLSGTVPSELPLSLKYLDLSSNAFSGEIPSTVGNLSLLQLINLSYNQFSGEIPATFGELQQLQYLWLDHNFLEGTLPSALANCSSLVHLSADGNSLGGVVSLSQNNLTGSIPSSVVCNVSVHAPSLRIVQLGFNGFTDFVGHETNTCFSVLQVLDIQHNGIKGTFPLWLTNVTTLSVLDLSNNALSGEIPPQIGKLAALTELKIADNSFSGVIPVEIKKCGSLGVVDFEGNEFGGEVPSFFGEMKGLKVLSLGGNSFFGSVPVSFGNLSILETLSLRSNRLNGSMPDMIMRMSNLTTLDLSENKFTGEIHDSIANLNRLIVLNLSGNGFSGKIPSSLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIAMQENKLSGVVPEGFSSLTSLQYVNLSSNAFSGHIPENYGFLRSLVVLSLSHNHITGTIPSEIGNCSDIEIIELGANSLAGHIPTDLSRLAHLRVLDLGGNNLTGDMPEDISKCSSLTTLLVDHNRLSGAIPGSLSVLSKLTMLDLSANNLSGEIPSNFSMISGLVYFNVSENNLEGEIPQTLASRFNNPSVFADNQGLCGKPLESRCEGIDNRDKKRLVVLIIIIAIGASVLVLFCCFYVFSLWRWRKKLKERVCGEKKRSPARASSGASGGRGSSENGGPKLVMFNTKVTLAETIEATRQFDEENVLSRTRFGLVFKACYNDGMVLSIRRLPDGSLDENMFRKEAESLGKIKHRNLTVLRGYYAGPPDMRLLAYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFIHQSTMVHGDVKPQNVLFDADFEAHLSDFGLERLTVATQGEAASTSTSVGTLGYVSPEAILTGETTRESDVYSFGIVLLELLTGKRPMMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQHSPA 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00654 1116 Gene3D Ribonuclease Inhibitor 249 458 IPR032675 -
Car08g00654 1116 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Car08g00654 1116 SMART serkin_6 822 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00654 1116 Gene3D Ribonuclease Inhibitor 162 248 IPR032675 -
Car08g00654 1116 SUPERFAMILY L domain-like 460 723 - -
Car08g00654 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1112 - -
Car08g00654 1116 Gene3D Transferase(Phosphotransferase) domain 1 898 1102 - -
Car08g00654 1116 ProSiteProfiles Protein kinase domain profile. 822 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00654 1116 Pfam Leucine Rich Repeat 467 489 IPR001611 GO:0005515
Car08g00654 1116 Gene3D Ribonuclease Inhibitor 459 736 IPR032675 -
Car08g00654 1116 SUPERFAMILY Protein kinase-like (PK-like) 801 1103 IPR011009 -
Car08g00654 1116 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 3 1112 - -
Car08g00654 1116 MobiDBLite consensus disorder prediction 781 802 - -
Car08g00654 1116 Gene3D Phosphorylase Kinase; domain 1 796 897 - -
Car08g00654 1116 SUPERFAMILY L domain-like 24 287 - -
Car08g00654 1116 Gene3D Ribonuclease Inhibitor 24 161 IPR032675 -
Car08g00654 1116 SUPERFAMILY L domain-like 250 554 - -
Car08g00654 1116 Pfam Leucine rich repeat 300 357 IPR001611 GO:0005515
Car08g00654 1116 Pfam Leucine rich repeat 635 694 IPR001611 GO:0005515
Car08g00654 1116 Pfam Leucine rich repeat 562 622 IPR001611 GO:0005515
Car08g00654 1116 Pfam Leucine rich repeat 395 454 IPR001611 GO:0005515
Car08g00654 1116 Pfam Leucine rich repeat 491 549 IPR001611 GO:0005515
Car08g00654 1116 SMART LRR_typ_2 393 416 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 609 633 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 513 536 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 138 162 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 441 464 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 537 559 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 561 585 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 321 345 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 657 680 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 465 489 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 417 440 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 184 207 IPR003591 -
Car08g00654 1116 SMART LRR_typ_2 208 231 IPR003591 -
Car08g00654 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 942 954 IPR008271 GO:0004672|GO:0006468
Car08g00654 1116 Pfam Protein kinase domain 832 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00654 1116 PRINTS Leucine-rich repeat signature 657 670 - -
Car08g00654 1116 PRINTS Leucine-rich repeat signature 324 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00654 Car-Chr8 5635989 5639617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00654 4 1116 Receptor kinase-like Gene Family AT4G36180 68.162 0.0 1485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Car08g00654 Pkinase 1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00654 - - gmx:100795838 1801.56