Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00645 ATGCAAAACAAAAACCATATGGATTCACTTCTTAAATTGCCAAGCATGGACAACTTTAAGGAAGAACCATTCTTTATGGCCATTATGTTCATCATACCACTAATACTTCTATTGGGTTTAGTGTCAATAATCCTTAGAAAACCAACATATCCACCTGGACCAAAAGGGTTACCTATTATAGGTAACATGCTAATGATGGACCAATTAACCCACCGTGGTTTAGCCAACTTAGCAAAACAATATGGTGGCATTTTTCACCTACGCATGGGGTTCCTCCACATGGTAGCTATTTCCGACGCCGACACGGCGCGCCAAGTACTCCAAGTTCATGACAACATCTTTTCCAATCGTCCGGCCACCGTTGCCATAAAATATTTAACTTATGATCGTGCTGACATGGCGTTCGCACACTACGGTCCCTTTTGGCGTCAAATGAGGAAACTCTGCGTCATGAAGCTTTTCAGCCGCAAGCGCGCAGAGTCTTGGGAATCTGTTAGAGACGAAGTTGACTATGCTGTCCGAACTGTTGCGGACAACATAGGTCAACCTGTGAACATCGGGGAACTGGTGTTCAACCTAACTAAAAACATAATCTATCGAGCGGCTTTCGGGTCGAGTTCCAAGGAAGGACAAGATAAGTTTATTGGGATATTGCAAGAGTTTTCCAAATTGTTTGGAGCTTTTAATATTTCGGACTTTGTACCTTGCTTAGGAGCTATTGACCCTCAAGGGTTTAACACTAGGCTTGTTAAGACTCGTAAAGCGTTGGATAGTTTCATAGATAAAATCATAGATGAACACGTGGAGAAGAAGAGGGATGTGAATAATGTTGTTGATGAAGAAACCGATATGGTAGATGAGTTGCTTGCTTTTCATAGCGAGGAGGCTAAACTTAATAATGAATCGGACGATCTTCATAACTCCATCAAACTTACTAAGGATAACATCAAAGCCATCATCATGGACGTAATGTTCGGAGGAACGGAAACAGTAGCATCAGCAATCGAATGGGCCATGGCGGAGCTAATGAGAAGCCCAAAAGATCTAAAAAGAGTCCAACAAGAGCTCGATGAAGTTGTGGGCCTGGGCCGTCGTGTCGAAGAGCCCGATTACGAGAAACTAACTTATCTTAAATGTGCTCTTAAAGAAACCCTACGCCTTCACCCACCAATCCCGTTACTTCTTCACGAAACCGCTGAGGATGCAACGGTTAACGGTTACTTTATCCCAAAGAAAGCGCGTGTGATGGTTAACGCGTGGGCGATTGGGAGGGACAGGAATTGTTGGGAGGAACCCGAAAGCTTTAAGCCTTCACGGTTTTTGAAACCGGGTGTGCCTGATTTTAAGGGTAGTAACTTTGAGTTTATTCCATTCGGGTCGGGTCGTAGATCTTGCCCCGGGATGCAGTTGGGTTTGTACGCGCTTGATTTGGCGGTGGCTCACTTACTTCATTGCTTCACGTGGGAGTTACCGAGTGGAATGAAACCGAGTGAATTGGATATGAGTGATGTGTTTGGACTCACTGCTCCTAGAGCGAGTCGACTCGTTGCTATTCCCACTAAGCGTGTTGTGTGTCCTCTCTAA 1584 0.4457 MQNKNHMDSLLKLPSMDNFKEEPFFMAIMFIIPLILLLGLVSIILRKPTYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGIFHLRMGFLHMVAISDADTARQVLQVHDNIFSNRPATVAIKYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWESVRDEVDYAVRTVADNIGQPVNIGELVFNLTKNIIYRAAFGSSSKEGQDKFIGILQEFSKLFGAFNISDFVPCLGAIDPQGFNTRLVKTRKALDSFIDKIIDEHVEKKRDVNNVVDEETDMVDELLAFHSEEAKLNNESDDLHNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPKDLKRVQQELDEVVGLGRRVEEPDYEKLTYLKCALKETLRLHPPIPLLLHETAEDATVNGYFIPKKARVMVNAWAIGRDRNCWEEPESFKPSRFLKPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPSGMKPSELDMSDVFGLTAPRASRLVAIPTKRVVCPL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00645 527 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 22 527 - -
Car08g00645 527 Gene3D Cytochrome P450 45 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 SUPERFAMILY Cytochrome P450 51 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Car08g00645 527 PANTHER CYTOCHROME P450 84A1-RELATED 22 527 - -
Car08g00645 527 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00645 527 Pfam Cytochrome P450 51 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00645 Car-Chr8 5518070 5521587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00645 58 527 Monolignol Biosynthesis Gene Families AT4G36220 76.533 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00645 K09755 - gmx:100783430 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00645 08 5518070 5521587 Car07g01588 07 15904689 15907764 PCT