Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00634 ATGGTGGCTGAACGAGCTAAGCTACACATAGCCTTAACATTTTTACAATTTTGTCATGCAGGAAATCATATATTCCTCAGAATTGCACTTAATACTGGAGTCAGCAAGCTTGTATTTCCTGTCTATAGAAACATCACCGCTTTCATTCTTCTAGCCCCACTTGCATATTTCACTGAAAAGAAAGACAGGCCTCCAATAACCAACTATTGTCTGCTACAATTTTTCCTACTTGGACTTGTTGGAATAACAATGAAAGAAGGATTTTACCTCTTGGGATTGGACAACACATCGCCGACATTTGCTTCTGCTATGCAAAATTCTGTTCCAGCCCTTACCTTTCTAATGGCTGTTATAATAAGGTATGAGAGTTTGCACTTAAATAAGATAGATGGTATGGCTAAGGTTCTTGGAGTCCTTGCTTCTGTTGGAGGAGCTTCAGTCATTACCCTTTACAAAGGACCTATCATTTATGCTCCACAATTAGCACTACATGAGGGGCAATTCTTGTCTCTATTTGGTGATGAAAATGGGAAAAACTGGAACTTGGGTGGCATCTTTCTCTTTGGTCACTGCTTGTGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTTAAAAAGTACTCAGCTCCACTTACAGTTTCTGCTTTTACTTGCTTCTTTGGTGTTTTGCAGTTTGTGGCAATTGCAGTTTTTCTTGAGAAGGATCCTAAAGCTTGGCAGCTCAATTCAAGTGAAGAGGCCTACAGTGTTTTGTACTCGGGACTGGTGACTTCAGGGCTGGCAGCAGCAATACAAATATGGACTATTAGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCCTTACAAACATTACTTGTAGCTTTGATGGCATCCATTGCTTTTGGTGAAGAGTTCTTCTTGGGAGGGATTATTGGAGCTGTCTTAATTATATCTGGCTTATACCTTGTTGTCTGGGGAAGAAGTCGAGAAATTAAGTCTGGTGAGGAATTCATAGTCTCCATTGAGCCTGAGAATCACTGCACAAATGGACCACTAGCTTCTGCTTCACGAGGCAAAGACAGTATTCTCCCAATGGAAGCAGAGTTGGATTTGGATCCCGAACAGCAAGAGATGATGGAAGGAGGTTTTTCCCAAATTCATTCAATTGATCCTAGGAGGGCTCGATTTCCGTGCTCTGTTGTTTGGTCACCACTTCCTGTCATCTCATGGTTCATTCCTTTCATTGGTCACATTGGCATATGTAGAGAGGATGGTGTTATTTTGGATTTTGCAGGTCCTAATTTTGTTTGTGTCGACAATTTTGCATTTGGTGCTGCCACTCGCTATCTTCAAATACCCAAAGAAAAGTGTTGCATCCCTTTAGGCCAGTCTGCATACAAGGGTGAGGAACACTACCTGCAGCATGAAACTGGAGGCGAGTTGAGGACCTGGGACGATGCTCTAAGGAAAAGCACTCAAGAATTCCAACACCGGTCTTACAGTCTATTTACGTGCAACTGCCACTCATTTGTTGCCAATAATTTGAACAGGCTCGGCTACCTGTCCAGTGGATGGAATGTAGTGAACCTTGCGATTTTCATTTTACTCAACGGACGCTGGGTCAGCAAAGCATCTATGCTCCAAACTATTTTACCATTTGTGATTGTATTTTTTCTTGGAGTCACATTGGGAGGCTTCACTTTTCTAAAATTTTGGTCCTTATTCACTGCAGTTCTTATTGGTTGGTTCCTTCTTGGCACGTACTGTTTTAAGAATCTGATTCAGTTGTAG 1779 0.4188 MVAERAKLHIALTFLQFCHAGNHIFLRIALNTGVSKLVFPVYRNITAFILLAPLAYFTEKKDRPPITNYCLLQFFLLGLVGITMKEGFYLLGLDNTSPTFASAMQNSVPALTFLMAVIIRYESLHLNKIDGMAKVLGVLASVGGASVITLYKGPIIYAPQLALHEGQFLSLFGDENGKNWNLGGIFLFGHCLCWSGWIVMQAFVLKKYSAPLTVSAFTCFFGVLQFVAIAVFLEKDPKAWQLNSSEEAYSVLYSGLVTSGLAAAIQIWTISKGGPVLASIYLPLQTLLVALMASIAFGEEFFLGGIIGAVLIISGLYLVVWGRSREIKSGEEFIVSIEPENHCTNGPLASASRGKDSILPMEAELDLDPEQQEMMEGGFSQIHSIDPRRARFPCSVVWSPLPVISWFIPFIGHIGICREDGVILDFAGPNFVCVDNFAFGAATRYLQIPKEKCCIPLGQSAYKGEEHYLQHETGGELRTWDDALRKSTQEFQHRSYSLFTCNCHSFVANNLNRLGYLSSGWNVVNLAIFILLNGRWVSKASMLQTILPFVIVFFLGVTLGGFTFLKFWSLFTAVLIGWFLLGTYCFKNLIQL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00634 592 Pfam EamA-like transporter family 16 133 IPR000620 GO:0016020|GO:0016021
Car08g00634 592 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020|GO:0016021
Car08g00634 592 PANTHER WAT1-RELATED PROTEIN 5 337 - -
Car08g00634 592 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 137 - -
Car08g00634 592 PANTHER WAT1-RELATED PROTEIN 5 337 IPR030184 GO:0016021|GO:0022857
Car08g00634 592 Pfam Protein of unknown function (DUF778) 452 536 IPR008496 -
Car08g00634 592 Pfam Protein of unknown function (DUF778) 401 450 IPR008496 -
Car08g00634 592 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00634 Car-Chr8 5426573 5431785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00634 2 361 Nodulin-like Gene Family AT1G75500 55.163 5.03e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00634 - - aprc:113869449 568.54