Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00632 ATGGCAGGTTTCTTTTCGTTAGGAAGAGGTAACAACAACAATAACGAAGGAGAAAATCAACAGAATAATATTCCACCTCCAACTCCTACTACAGATACTTTATTCTGGTATAATAATCAAAACAAGAATGACGACGTCGTTTCAACGTACCGTGGTTTTGAGATTTGGAATcagcatcaacaacaacagcaacaacaGTTTTTGGGGGGCGTAGAACAGCAAGATCTTTACTCATCTGCTGCGGCGTTAGGAGTGGGTCCCAGTAGAGGTTCAGATGAGAGGAGATCTAATGAGTTAGTTGCGTCGTCGGGAGGGATAAGCTGTCAAGATTGTGGGAATCAAGCGAAGAAGGATTGTCCTCATGTTAGGTGTAGAACTTGTTGTAAGAGTAGAGGTTTTGATTGTCAAACTCATGTTAAGAGTACTTGGGTTCCTGCTGCAAGACGCCGTGAAAGacaacaacaacaacatcaccaacaCACTCATCATAATAATAAATTAGAAACCTCTTTAGCTTGCACTCGCTTACCTTCAAACCCTTCTTCACTCCCTCTCCCTGCACCAGGGTTATTAGAGGAGGTGAATTTTCCAGCTATGGTGAGTTCTCAAGCGGAGTTTAGATGTGTTCGTGTAAGTTCAATTGATGAGTCTGAGGAAGAGTATGCATATTCAACGGCTGTGAACATTGGAGGGCATGTTTTTAGAGGAATATTGTATGATTATGGTCCAGATGGAAGTGGTAATTATATGGCTGCCGGAAACACCTCTTCAAGTGGTGTTGAAGCGGTGGTTGAGCCGTTGAACCTAATTTCAGGTGTTCCTAGCAGTGAAATTGTTGATCCATGTTCTTTGTATCCAGCTCCAATTAACACCTTCATGCCTCCTAGTGGTACGCAATTCTTCCCCCACCCAAGATCTACTTGA 924 0.4058 MAGFFSLGRGNNNNNEGENQQNNIPPPTPTTDTLFWYNNQNKNDDVVSTYRGFEIWNQHQQQQQQQFLGGVEQQDLYSSAAALGVGPSRGSDERRSNELVASSGGISCQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHVKSTWVPAARRRERQQQQHHQHTHHNNKLETSLACTRLPSNPSSLPLPAPGLLEEVNFPAMVSSQAEFRCVRVSSIDESEEEYAYSTAVNIGGHVFRGILYDYGPDGSGNYMAAGNTSSSGVEAVVEPLNLISGVPSSEIVDPCSLYPAPINTFMPPSGTQFFPHPRST 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00632 307 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 107 149 IPR006510 -
Car08g00632 307 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 306 IPR007818 GO:0003700|GO:0006355
Car08g00632 307 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 1 306 - -
Car08g00632 307 MobiDBLite consensus disorder prediction 7 32 - -
Car08g00632 307 Pfam Domain of unknown function (DUF702) 105 244 - -
Car08g00632 307 MobiDBLite consensus disorder prediction 1 32 - -
Car08g00632 307 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 196 243 IPR006511 -
Car08g00632 307 MobiDBLite consensus disorder prediction 148 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00632 Car-Chr8 5408157 5410141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00632 1 293 C2H2 Transcription Factor Family AT5G66350 46.243 6.64e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Car08g00632 DUF702 7.1e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00632 - - gmx:100814589 310.457