LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car08g00628	ATGGTCAATTCTATAAACTTTCTCCTGCTTTTTTCTCTACTTGTCTTTGCTCCTTTCTGTCACTGTAAAAAGAAAGTAGGGGGTTACCTCTACCCTCAGTTTTACGATGATTCATGCCCCAAGGTTGAAGAGATTGTCAAGTCCATAGTTGCCAAGGCTGTCACTAaagaaccccgcatggctgcttccttgctgagacttcatttccatgactgttttgtcaaGggttgcgatgcatcggttttgctagatagcagtggaaccatcatcagtgaaaagaggtcaaacccgaaccgtaattcagctagaggatttgaagtcattgatgaaattaaatcagcactagagaaagaatgtcctcatacagtgtcttgtgctgatattttgactctagctgctagagattcaactgttcttactggaggaccaagctggggtgtacctttgggaagaagggattctcttggtgcaagcatcagtggatcaaataataacattcctgcccccaACAATACATTCCAAACCATCTTAACAAAATTCAAGCTTAAGGGACTTAACATTGTTGATCTAGTTGCTCTATCTGGTAGCCACACTATAGGAGATTCGCGGTGCACTAGCTTTAGGCAAAGACTCTACAACCAAACTGGGAATGGCAAATCAGATTTCACTCTTGACCAAAACTATGCAGCTCAATTGCGCACTCAGTGTCCAAGATCTGGTGGAGACCAAAATCTGTTTGTCCTAGACTTTGTCACCCCAGTAAAATTCGACAACTACTACTTCCAGAACTTATTGGCCAACAAGGGTTTGTTAAGTTCTGATGAAATTCTGTTGACAAAGAATCAAGTATCTGCAGCTTTAGTGAAAAAGTATGCTGAAAGCAATGATCTTTTCTTTGAACAATTTGCCAAGTCCATGGTTAGGCTGGGAAATATTACTCCTTTAACAGGATCAAGGGGTGAAATCAGAAAACACTGCAGAAAGATTAACACCTGA	996	0.2631	MVNSINFLLLFSLLVFAPFCHCKKKVGGYLYPQFYDDSCPKVEEIVKSIVAKAVTKEPRMAASLLRLHFHDCFVKGCDASVLLDSSGTIISEKRSNPNRNSARGFEVIDEIKSALEKECPHTVSCADILTLAARDSTVLTGGPSWGVPLGRRDSLGASISGSNNNIPAPNNTFQTILTKFKLKGLNIVDLVALSGSHTIGDSRCTSFRQRLYNQTGNGKSDFTLDQNYAAQLRTQCPRSGGDQNLFVLDFVTPVKFDNYYFQNLLANKGLLSSDEILLTKNQVSAALVKKYAESNDLFFEQFAKSMVRLGNITPLTGSRGEIRKHCRKINT	331

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car08g00628	331	PANTHER	PEROXIDASE 72-RELATED	5	330	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Car08g00628	331	Pfam	Peroxidase	46	294	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Car08g00628	331	PRINTS	Haem peroxidase superfamily signature	61	75	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Car08g00628	331	PRINTS	Haem peroxidase superfamily signature	123	140	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Car08g00628	331	PRINTS	Haem peroxidase superfamily signature	141	153	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Car08g00628	331	PRINTS	Haem peroxidase superfamily signature	189	204	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Car08g00628	331	PRINTS	Haem peroxidase superfamily signature	249	264	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Car08g00628	331	Gene3D	-	34	330	-	-
	Car08g00628	331	ProSiteProfiles	Plant heme peroxidase family profile.	29	330	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Car08g00628	331	CDD	secretory_peroxidase	30	329	IPR033905	GO:0004601\|GO:0042744

Showing 1 to 10 of 24 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car08g00628	Car-Chr8	5385322	5387699	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car08g00628	1	330	Peroxidase	AT5G66390	74.775	0.0	526

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car08g00628	K00430		-	gmx:100788562	605.134

Showing 1 to 1 of 1 entries