Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00626 ATGAAAACACCCATTGTTAACCGTTTCTCTTCCTCTTTTACAAACATTGGTTCAGCATCATCATGGTTCGAGATTTATGCAGCCTTCTCAACATTCATGATGCTTTTAAGAACCGCAATCAACGATCTCATACCCTTAGGACTTAGAACTTTCATAATCTCAAAGCTTAAATATTTCTTCTCAGATTATCATCCCAACAACAACACGGTCTCACTTCAAATCCATCAGTTTTGGGATGGAAATGCAAACCATCTCTTCAATGCAGCCAAAGAGTATCTCCCAACAAAAATCTCCCACACTTATAAATCCCTCAAAGTTGGAAAATTATCCAAAAACAAAAACATTCTTTTTGCTTTTGATGGAAAGCAAGTTGTGGTTGATGAATTTGAAGGCATAAAACTTAAATGGAAGATTATTGAAGACTCAGAAGTTGATGATTTTGACAATCCCAAAGAGAAAGCATTTAATAGGCGTAGGTTAAAAAGATATTATGAGGAGGATGGACTTATGCTAAGTTTTGATGAGAAGCATAGAGACAAAGTTATGAATGAATATATTCCCTATGTTTTAAGCGTTTATGAGAATATAAAAGCAGGACAAAGGACACTTAAGATTCATTCTATGCAAACTGGACCTTGGCAATCAAGTGATTTAACACATCCAGCTTCTTTTGAATCACTTGCTTTAGATCCTGATTTAAAAAAGGTTATAATTGATGATTTGGATAGGTTTTTGAGGAGAAAAGAGCTTTATAAGAAAGTTGGTAAGCCTTGGAAACGTGGTTATTTATTGTATGGACCTCCAGGGACAGGAAAATCTAGTCTTATTGCTGCTATGGCTAAATACTTGAAATTTGATGTCTATGATTTGGAGTTAAGTGCTATTTATTCTAATTCCGAACTTATGAGAGCTATGAGGGAGACATCTAACAGTTCTATTATTGTCATTGAAGATATTGATTGCAACACTGAGGTACTACATCGATCAAAACAAGATAAGTTTTTGGATAAGGATCAGTTGGACCCTGTCTTAGACCTTAAGGGGACTAAGAAGGTGCCTAAAAGGTTTACTATGTCGGGTCTTCTCAACTATATGGATGGTTTATGGTCAAGTTATGGAGATGAACGAATTGTGATATTTACTACAAACCATAGGGACAAAATAGATCCAGCATTGTTGCGCCCTGGTCGCATGGACATGCATATTCACTTGTCTTTTCTTAAAGCCAAGGCATTTAGAACCTTAGCTTATAATTATTTGGACATTGAAGGTAATCATCATCACCCACTCTTTGATCAAATTGAAGAGTTATTGGAGAAAGTAGAGGTCACCCCTGCTGTTGTGGCAGAGTATTTGTTGAGAAGCGAGGATCCTGATGTTGCTCTTCAAGGACTTATTCAATTTCTTCAAGAAACTGATGTTTCAAAAGAAATTATGACTGTAGCTACATAG 1452 0.3595 MKTPIVNRFSSSFTNIGSASSWFEIYAAFSTFMMLLRTAINDLIPLGLRTFIISKLKYFFSDYHPNNNTVSLQIHQFWDGNANHLFNAAKEYLPTKISHTYKSLKVGKLSKNKNILFAFDGKQVVVDEFEGIKLKWKIIEDSEVDDFDNPKEKAFNRRRLKRYYEEDGLMLSFDEKHRDKVMNEYIPYVLSVYENIKAGQRTLKIHSMQTGPWQSSDLTHPASFESLALDPDLKKVIIDDLDRFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLIAAMAKYLKFDVYDLELSAIYSNSELMRAMRETSNSSIIVIEDIDCNTEVLHRSKQDKFLDKDQLDPVLDLKGTKKVPKRFTMSGLLNYMDGLWSSYGDERIVIFTTNHRDKIDPALLRPGRMDMHIHLSFLKAKAFRTLAYNYLDIEGNHHHPLFDQIEELLEKVEVTPAVVAEYLLRSEDPDVALQGLIQFLQETDVSKEIMTVAT 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00626 483 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 15 477 - -
Car08g00626 483 Pfam Domain associated at C-terminal with AAA 45 139 IPR025753 -
Car08g00626 483 Gene3D - 215 402 IPR027417 -
Car08g00626 483 CDD AAA 247 405 - -
Car08g00626 483 Pfam ATPase family associated with various cellular activities (AAA) 263 404 IPR003959 GO:0005524|GO:0016887
Car08g00626 483 PANTHER BCS1 AAA-TYPE ATPASE 15 477 - -
Car08g00626 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 456 IPR027417 -
Car08g00626 483 ProSitePatterns AAA-protein family signature. 376 394 IPR003960 GO:0005524|GO:0016887
Car08g00626 483 SMART AAA_5 258 408 IPR003593 -
Car08g00626 483 Gene3D - 403 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00626 Car-Chr8 5375745 5377926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00626 232 444 Calmodulin-binding Proteins AT3G56690 25.514 6.47e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00626 - K08900 gmx:100787726 597.045