Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00583 ATGTCTTCCCCTACTGACTCTTCTCCAGATAACTCCACACCTGATAACTCCACACCAGACAATAGTACCCCTGATGATGCTGATAACTCTTCTTCGCCACCATCACCACCATCACAATCACCGCCATCACAATCACCGCCATCACAATCACCACCATCACAATCACCACCAGTAGAACCACCACCACAGTCACCGCCACCATCACCGCCTTCACAGCCCCCGCCCTCCCCTTCACCATCCCCACCATCTCCTTCACAATCACCGCCAACTCCTTCACAGTCACCACCACCTTCACCGCCTTCACAATCACCACCATCACCTTCACAATCAACACAACCTTCTCCTCCCCCACATACACCAAACAACCCATCCCCTCCATCACCCAATGGAGGCTCACAGCCACCACCTCCGGTAGCGGGCCGTTCACCCTCGACCGGATCCGGATCAACCCCACACAAATCATTACCTAATACACCATCTTCAGGAAattcaaatgataattacaataatgacaacaacagtaatgatgataccaaggcaataatTGGAGCAGTGATTGGAGTGGGAGGTGTTCTTCTCATTTTTATCATTGTTTGTGTTATTTGCACCAGGAAGAAGAAAAGAAAGCAAATGTACTATTATGGAGATCACCCATCTCATGGAAAAGGGAATAATAATAACTATTACAACAGTGGGCCGCCCCCAAATTACTACGGAGGTCCACATGGGGAACATGTTGTTAGGGTACAAAATGGAATGGGTCCTAATGGTGGTGGTGGGTGGGGTGCACCACCTCCTCTGAACCTAATGAGCAGTGCAGACATGAGCTCAAATTACTCGACCGGACCACCTCCTTTGCCTCCTCCCTCACCAAACCTTGCTTTAGGGCTTAAAGGAGGCACCTTCACTTATGAGGAATTGGCCGCGGCAACCGACGGATTCATAGATGCCAATTTGATAGGACAAGGTGGTTTCGGTTATGTCCATAAGGGTGTGTTGCCCAGTGGAAAGGAAATAGCTGTCAAGAGTTTAAAATCGGGTAGCGGCCAAGGAGAGCGGGAGTTTCAAGCTGAGATTGACATAATCAGCCGTGTTCATCATCGTCATCTTGTCTCACTTGTTGGATACTGTATTTCTGGTGGTCAAAGAATGTTGGTCTATGAATTTATTCCGAATAACACGTTGGAGTTTCACCTTCATGGAAAGGGTCGACCTACCATGGATTGGCCAACTAGAATGAGGATTGCAATAGGTTCTGCTAAAGGGCTTGCTTATCTTCACGAGGATTGTCATCCTCGCATCATTCATCGTGACATCAAAGCTGCAAATGTCCTTATCGATGATAGCTTTGAAGCAAAGGTTGCTGATTTTGGGTTGGCTAAGTTAACCAGTGACAATAATACTCATGTATCAACTCGTGTCATGGGAACTTTCGGGTACCTAGCCCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAGTCTGATGTTTTCTCATTTGGGGTTATGCTATTGGAACTGGTAACTGGAAAGCGACCTGTGGACGTCACAATTACCATGGATGACAGCTTAGTGGATTGGGCTAGACCACTACTAACTCGTGGACTGGAGGAGGATGGAAACTTTAGTGAGTTGGTGGATCCATTTTTGGAAGGAAACTACAATCCTCAAGAACTCACAAGAATGGCAGCTTGTGCTGCTGCTAGCATTCGTCATTCTGCCAAGAAGCGTCCTAAAATGAGTCAGATTGTAAGAACATTGGAAGGAGATGTTTCACTGGATGATTTGAAGGATACAATTAGGCCAGGGCATAGCACTGTTAATACCTCTTCATCTGGTAGTTCAGAGTATGACACAATGCAATATAATGCTGATTTGCAGAAGTTCAGAAAGGCAGTGTTTTCCAGCCAGGAGGAATTTGGCAACAGCAGTTGCTCCAGTGGTGATATGAGCCAAACTTCAAAGCAGAAGCCACAACAATTTCTTTAA 1989 0.4535 MSSPTDSSPDNSTPDNSTPDNSTPDDADNSSSPPSPPSQSPPSQSPPSQSPPSQSPPVEPPPQSPPPSPPSQPPPSPSPSPPSPSQSPPTPSQSPPPSPPSQSPPSPSQSTQPSPPPHTPNNPSPPSPNGGSQPPPPVAGRSPSTGSGSTPHKSLPNTPSSGNSNDNYNNDNNSNDDTKAIIGAVIGVGGVLLIFIIVCVICTRKKKRKQMYYYGDHPSHGKGNNNNYYNSGPPPNYYGGPHGEHVVRVQNGMGPNGGGGWGAPPPLNLMSSADMSSNYSTGPPPLPPPSPNLALGLKGGTFTYEELAAATDGFIDANLIGQGGFGYVHKGVLPSGKEIAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFIPNNTLEFHLHGKGRPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELVTGKRPVDVTITMDDSLVDWARPLLTRGLEEDGNFSELVDPFLEGNYNPQELTRMAACAAASIRHSAKKRPKMSQIVRTLEGDVSLDDLKDTIRPGHSTVNTSSSGSSEYDTMQYNADLQKFRKAVFSSQEEFGNSSCSSGDMSQTSKQKPQQFL 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00583 662 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 76 652 - -
Car08g00583 662 MobiDBLite consensus disorder prediction 30 141 - -
Car08g00583 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Car08g00583 662 MobiDBLite consensus disorder prediction 639 662 - -
Car08g00583 662 ProSiteProfiles Protein kinase domain profile. 314 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00583 662 SMART serkin_6 314 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00583 662 Pfam Protein tyrosine and serine/threonine kinase 319 586 IPR001245 GO:0004672|GO:0006468
Car08g00583 662 PRINTS Proline rich extensin signature 7 19 - -
Car08g00583 662 PRINTS Proline rich extensin signature 36 52 - -
Car08g00583 662 PRINTS Proline rich extensin signature 57 74 - -
Car08g00583 662 PRINTS Proline rich extensin signature 75 100 - -
Car08g00583 662 PANTHER RECEPTOR-LIKE KINASE 76 652 - -
Car08g00583 662 MobiDBLite consensus disorder prediction 598 617 - -
Car08g00583 662 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Car08g00583 662 Gene3D Phosphorylase Kinase; domain 1 294 389 - -
Car08g00583 662 Gene3D Transferase(Phosphotransferase) domain 1 390 600 - -
Car08g00583 662 MobiDBLite consensus disorder prediction 602 617 - -
Car08g00583 662 MobiDBLite consensus disorder prediction 142 172 - -
Car08g00583 662 SUPERFAMILY Protein kinase-like (PK-like) 293 587 IPR011009 -
Car08g00583 662 MobiDBLite consensus disorder prediction 1 172 - -
Car08g00583 662 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00583 Car-Chr8 4950584 4955373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00583 184 657 Trihelix Transcription Factor Family AT1G70460 49.588 2.57e-153 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Car08g00583 PK_Tyr_Ser-Thr 7.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00583 - - gmx:100777163 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00583 08 4950584 4955373 Car08g00583 08 4950584 4955373 ECH
Car08g00583 08 4950584 4955373 Car07g01527 07 15035739 15039344 PCT