Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00573 ATGGCAAAGGAATATTCATCACAGCAGCTCTCATTCTCAGTCTCAAATACTATGCTCCTTTTTCATCTCTCACTCACCTGTTCGTCGCAGAACGACGAAAACGGGATAAGTGttgatgatgtttccgattttgatgatggttttgtgtttgatattgatCCATGTTTACTTGTGAATTGTGATAAATTAGACATTGGTGAAATGATTGGAGAAGGATCTTACTCTATTGTATATAAAGGATGGTATGAAAGTCGTCCCGTAGCTATTAAGATGATACTCCCTCAAAGAACAAAGGATGCTACACCAGAATGTAAGGCCAAATTTCAGAGGGAGGTGAAGTTATTATCTGGGATTGATCATAGAAATGTTGTGAAGTTTATTGGAGCCACTGTGAAACCATCAATGATGATAATTACAGAACTTTTAGAAGGAGGTTCACTTCAAAAAAACTTGAAGAGCATTTATCCAACAGCTTTTTCTTTAGAACAATGTTTAAATTATGCTCTGGATATTTCTCAAGCTATGGAATATTTGCATGCAAATGGCATCATTCATCGTGATCTCAAGCCTGGTAACTTACTGCTTACAGAAGACAAGATTAATGTTAAAGTTGCTGACTTTGGAACAGCTAGAGAGGATATATGTGATGAGATGACATGTGAAGCTGGTACTTATAGATATATGGCTCCTGAGCTATTCAGCAAAGATCCACTTCCAAAGGGAGCAAAGAAAAGCTATGATCGTAAGGCAGATGTGTACAGTTTTGCAATAGTTATGTGGTCTTTGATCAAAAATCAAACTCCATTTAAAGAAAGGAAAGACTTCATGGCAGCATATGCTATGGCTAACAATATGAGACCAAGTGTGGATGGATTTCCAAAAGATATACTCCCCTTGTTGCAATCTTGTTGGGATGATGATCCAAAACTCCGACCCGAATTCACCGAAATAGTTGAAACACTAAAAAGGATTCTCCAAAATCTTTACTCAACAAAGAATATTAGTGAGCATGGGGATATAAAAGAAGTTGATAGCAAAATTCATGAGGAAGAAAGTGCAAAGACACTTTCCACAACAAGCCTAGAGTCCTCTAAGAAGAATGAAAACATTCCCAAACTTGAGAATGAGACTATAAAACCCAATGATGGAACACATGGCAAGTCTCAATCTCAATCTCACAATGGAATTCTCCCAGCCTTAGTGCAAAGGAAGCCAAAAAAGAAAAATAAGATCAACCGTTTGTTTTCTTGTTTTCGTTGTTGCTTTGCTTCTTGA 1275 0.36 MAKEYSSQQLSFSVSNTMLLFHLSLTCSSQNDENGISVDDVSDFDDGFVFDIDPCLLVNCDKLDIGEMIGEGSYSIVYKGWYESRPVAIKMILPQRTKDATPECKAKFQREVKLLSGIDHRNVVKFIGATVKPSMMIITELLEGGSLQKNLKSIYPTAFSLEQCLNYALDISQAMEYLHANGIIHRDLKPGNLLLTEDKINVKVADFGTAREDICDEMTCEAGTYRYMAPELFSKDPLPKGAKKSYDRKADVYSFAIVMWSLIKNQTPFKERKDFMAAYAMANNMRPSVDGFPKDILPLLQSCWDDDPKLRPEFTEIVETLKRILQNLYSTKNISEHGDIKEVDSKIHEEESAKTLSTTSLESSKKNENIPKLENETIKPNDGTHGKSQSQSHNGILPALVQRKPKKKNKINRLFSCFRCCFAS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00573 424 Gene3D Phosphorylase Kinase; domain 1 55 143 - -
Car08g00573 424 PANTHER SERINE-THREONINE PROTEIN KINASE 5 356 - -
Car08g00573 424 ProSitePatterns Protein kinases ATP-binding region signature. 69 90 IPR017441 GO:0005524
Car08g00573 424 SMART serkin_6 63 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00573 424 Gene3D Transferase(Phosphotransferase) domain 1 144 369 - -
Car08g00573 424 PANTHER PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED 5 356 - -
Car08g00573 424 Pfam Protein tyrosine and serine/threonine kinase 64 321 IPR001245 GO:0004672|GO:0006468
Car08g00573 424 MobiDBLite consensus disorder prediction 367 381 - -
Car08g00573 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Car08g00573 424 MobiDBLite consensus disorder prediction 343 403 - -
Car08g00573 424 PRINTS Tyrosine kinase catalytic domain signature 139 152 IPR001245 GO:0004672|GO:0006468
Car08g00573 424 PRINTS Tyrosine kinase catalytic domain signature 177 195 IPR001245 GO:0004672|GO:0006468
Car08g00573 424 PRINTS Tyrosine kinase catalytic domain signature 250 272 IPR001245 GO:0004672|GO:0006468
Car08g00573 424 PRINTS Tyrosine kinase catalytic domain signature 292 314 IPR001245 GO:0004672|GO:0006468
Car08g00573 424 CDD STKc_MAP3K-like 69 321 - -
Car08g00573 424 SUPERFAMILY Protein kinase-like (PK-like) 57 334 IPR011009 -
Car08g00573 424 ProSiteProfiles Protein kinase domain profile. 63 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00573 424 MobiDBLite consensus disorder prediction 382 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00573 Car-Chr8 4877207 4882224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00573 45 330 MAP Kinase Kinase Kinase AT5G66710 52.613 1.03e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car08g00573 PK_Tyr_Ser-Thr 1.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00573 - K04427 gmx:106796450 410.994