Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00568 ATGACCGGCGGTGGATCGTCGGGGAGGTTACCAACGTGGAAGGAGAGAGAAAACAATAAGAGAAGAGAGAGAAGACGAAGAGCTATTGCTGCTAAGATCTATTCAGGACTTCGATCTCAAGGAAACTTCAAGCTTCCTAAACACTGTGACAACAACGAAGTCTTGAAAGCTCTTTGTGCTGAAGCTGGTTGGATCGTTGAAGAAGATGGCACTACCTATCGGAAGGGAAGCAAGAGACCACTGCCAAATGAGATTGGAGGAACTCCACCAAATATGAGTGCTTGTTCTTCGATGCAGCCAAGTCCACAATCGTCATCGATTTCCAACAGTGCTCCTGTTACCCCACCTCTTTCTTCTCCCAGAAGTTCAAAGCGAAAAGCTGATTTTGAATCCCTCTCTAATGGTTCCCTTAACTCCTCATTTCGCCACCCGCTTTTTGCTACCTCTGCACCGTCAAGCCCCTCGCGCCGTAACCACTTACCCCCTTGTTCTATTCCAGAATGTGACGAGTCTGATGCTTCTACTGTGGACTCTGATCGATGGGTTAGTTTTCAAACAACAGGTGCCCAAGGTGCTGCTCCTCCTTCACCTACATTTAATCTTATGAAACCAGTAATGCAGAAGATCACTCCTCAGGGTTCGATGGATATGATTCATATGAACGAAGGTATGCAATGGGCTTCAAGTTCAGCTGCTGAGAGAGGTAGAGGCTCAGATTTTGACTTTGAGAATGGCAGAGTTGTGAAGCCGTGGGAAGGTGAGAGAATTCATGAAGTAGGAATGGATGAATTGGAGCTTACTCTCGGGTTTGAACGTGTGCCTGGTTTTCTTGGCGACAAGGGCATTGCTTGGATCTTCTACTTCTGCATTAGTCAGGGAAATTCCGAATTGGGTGTTATGCTATAA 906 0.4647 MTGGGSSGRLPTWKERENNKRRERRRRAIAAKIYSGLRSQGNFKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGSKRPLPNEIGGTPPNMSACSSMQPSPQSSSISNSAPVTPPLSSPRSSKRKADFESLSNGSLNSSFRHPLFATSAPSSPSRRNHLPPCSIPECDESDASTVDSDRWVSFQTTGAQGAAPPSPTFNLMKPVMQKITPQGSMDMIHMNEGMQWASSSAAERGRGSDFDFENGRVVKPWEGERIHEVGMDELELTLGFERVPGFLGDKGIAWIFYFCISQGNSELGVML 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00568 301 MobiDBLite consensus disorder prediction 129 159 - -
Car08g00568 301 MobiDBLite consensus disorder prediction 1 25 - -
Car08g00568 301 MobiDBLite consensus disorder prediction 73 176 - -
Car08g00568 301 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 107 270 IPR033264 GO:0003700|GO:0006351|GO:0009742
Car08g00568 301 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 106 IPR033264 GO:0003700|GO:0006351|GO:0009742
Car08g00568 301 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 126 IPR008540 -
Car08g00568 301 MobiDBLite consensus disorder prediction 89 121 - -
Car08g00568 301 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 107 270 - -
Car08g00568 301 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00568 Car-Chr8 4818646 4821892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00568 9 269 BZR Transcription Factor Family AT1G75080 47.077 9.43e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Car08g00568 BES1_N 3.8e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00568 K14503 - gmx:100795837 330.487