Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00557 ATGTCTGTCTTCTTTCTTCCCTCTAGATCTCATGTTCTTTTTCTTGCACTCATGTTGTTTCTCACTAACATCTCAGCTCAATCACAACACCTCAGTGGAACAAACTTTTCATGCCCTGTGGATTCACCTCCTTCATGTGAAACTTATGTGACATACATTGCTCAGTCTCCAAATTTTTTAAGCCTAACAAACATATCTGATTTATTTGATATCAGTCCTTTATCCATCGCAAGAGCGAGTAACATAGACGACGAGGATAAAGAGCTGATACCAGGTCAAGTCTTATTAGTACCTGTAACTTGTGGCTGCACTAAACATCGCTCTTTCGCCAATAACACCTACACGATCAAGCTCGGCGACAGCTACATTCTAGTTTCAACCACTTCATATCAGAATCTCACCAATTATCTTGAAATGGAAGATTCCAACCCTGGTCTAAATCCTAATCTTATTCCACCATTCATCAAAGTTGTAGTCCCAATATTCTGCAGGTGCCCTTCAAAGACTCAGCTGAACAAAGGAATAAAGTATCTGATAACTTACGTGTGGCACGCTAACGACAATGTTTCAACTGTAAGTTCCAAATTTGGTGCATCACAAGTTGATATATTGACTGAAAACAATTACAATCAAAACTTTGCTTCTGCAGCCAACCTTCCAGTTTTGATTCCTGTGACAAGGTTACCTATTCTAGCTCAACCGTCTTCGAATGGAAGAAAGAGAAGCATTCAACTTCCTGTTATAATTGGTATTAGTATAGGAAGTGCTTTTTTCGTTACAGTTTTAACAGTATCACTTGTGTATTTATACTGTCTGAAAATGAAGAGATTGAATAGGACTGCTTCTTTATCTGAGACTGCAGATAAGTTACTTTCAGGAGTTTCGGGTTACGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGCTACAATGAACCTGAGTGACCAATGTAAGATTGGTGAATCAGTTTATAAGGCTAATATAGATGGTAAAGTTTTAGCAGTGAAAAAAACTAAGAAAGATGCTTCTGAGGAGCTGAAAATTCTGCAGAAGGTAAATCATGGAAATCTGGTGAAACTAATGGGTGTGTCTTCGGACAACGAGGGTAACTGTTTTCTGGTTTATGAGTATGCTGAAAATGGTTCTCTTGATGAATGGTTGTTCTTGGAATCTTCGAAAACTTCGGATTCGACAGTCTCCCTTACATGGTCTCAGAGAATAGGCATAGCAGTGGATGTTGCAGTTGGTCTGCAATACATGCATGAACATACTTATCCAAGGATAATCCACAGAGACATCACAACAAGTAATATCCTTCTCGACGCGAACTTTAAGGCCAAGATAGCGAATTTTTCGATGGCTAGAACTTCAACCAACCCGATGATGCCGAAAATAGATGTTTTCGCTTTTGGGGTGGTTCTGATAGAGTTGCTAACCGGAAAAAAAGGCGTAACAACGAAAGAAAATGGTGAGGTTGTTATTATGTGGAAGGATTTTTGGATGATTTTTGATCTAGAAGGGAATAAAGAAGAGAGGCTAAGAAAATGGATGGATCCTAAGTTAGAAAACTTTTATCCTATAGATAATGCTCTTAGTTTGGCTTCTTTGGCAGTGAATTGCACTGCTGATAAATCATTGTCAAGACCAACTATTGAAGAAATTGTTCTTTGTCTTAACCTTCTCAATCAACCATCATCTGAACCAACATTAGAAAGATCTTTGACATTTGGGTTAGATGTTGAAGATACTCAAATTGTTACTTCTATAGCAGCTCGTTGA 1788 0.3826 MSVFFLPSRSHVLFLALMLFLTNISAQSQHLSGTNFSCPVDSPPSCETYVTYIAQSPNFLSLTNISDLFDISPLSIARASNIDDEDKELIPGQVLLVPVTCGCTKHRSFANNTYTIKLGDSYILVSTTSYQNLTNYLEMEDSNPGLNPNLIPPFIKVVVPIFCRCPSKTQLNKGIKYLITYVWHANDNVSTVSSKFGASQVDILTENNYNQNFASAANLPVLIPVTRLPILAQPSSNGRKRSIQLPVIIGISIGSAFFVTVLTVSLVYLYCLKMKRLNRTASLSETADKLLSGVSGYVSKPTMYEMDVIMEATMNLSDQCKIGESVYKANIDGKVLAVKKTKKDASEELKILQKVNHGNLVKLMGVSSDNEGNCFLVYEYAENGSLDEWLFLESSKTSDSTVSLTWSQRIGIAVDVAVGLQYMHEHTYPRIIHRDITTSNILLDANFKAKIANFSMARTSTNPMMPKIDVFAFGVVLIELLTGKKGVTTKENGEVVIMWKDFWMIFDLEGNKEERLRKWMDPKLENFYPIDNALSLASLAVNCTADKSLSRPTIEEIVLCLNLLNQPSSEPTLERSLTFGLDVEDTQIVTSIAAR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00557 595 Gene3D Transferase(Phosphotransferase) domain 1 463 577 - -
Car08g00557 595 Gene3D Transferase(Phosphotransferase) domain 1 381 462 - -
Car08g00557 595 ProSiteProfiles Protein kinase domain profile. 284 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00557 595 Gene3D Phosphorylase Kinase; domain 1 292 380 - -
Car08g00557 595 Pfam LysM domain 61 98 IPR018392 -
Car08g00557 595 ProSiteProfiles LysM domain profile. 50 97 IPR018392 -
Car08g00557 595 SUPERFAMILY Protein kinase-like (PK-like) 301 563 IPR011009 -
Car08g00557 595 ProSitePatterns Tyrosine protein kinases specific active-site signature. 431 443 IPR008266 GO:0004672|GO:0006468
Car08g00557 595 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 18 595 - -
Car08g00557 595 Pfam Protein tyrosine and serine/threonine kinase 339 460 IPR001245 GO:0004672|GO:0006468
Car08g00557 595 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 18 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00557 Car-Chr8 4713352 4715480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00557 80 564 Receptor kinase-like Gene Family AT3G21630 32.593 4.34e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car08g00557 PK_Tyr_Ser-Thr 4.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00557 - - cam:101515074 1087.79