Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00533 atgtcattttcgttgttctccacgcctcagcaaccgcaacaacaacaacaactctttcaaccacagcaacagcaacaatctccttttcagcaccagactaatttgttccagcagcaacaacaacagcaacagcaatttcaacagcagcagcaacaacaacaatttcaagcacaacagcagcagcagcagcagcagcaacaattatttttgttcactaacgatagaactcctgctagttacagtactaattgggcggATCTACATCCTGATTCTCAGAAGATTCTACTTCAAATCGAGGAACGGATATTGGAATATAGAGATGAAAGCCAGAGACTTGACCAGTGTAATCGTCTTTATGATTCTTCAGTTTTCAATGATGGATTTGAGGTTGATGCAAGCCATATTGTTCAGGAACTTGGTGGAATCGGAACTGCTATGGAACGGCAGAAAACTTTGCTACAGGAACTGATGTCAGTTGTTAAGGATATGTTACGTAATACAGAGGTTGCTGTTCGTTCATTTATGATGCTACGTACAAGGTTCCTTCATCCCAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACCCCTGGAACAACGAGTAGCCAACCAACAGCTACATCTATAGTACCCGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCACCCTTTTTACAGCAAACTGTACTTAGATTTGAGAAATATATTGGTGAATGCCATCAGTGGATTGAAGAGTTAGAGCAGCTGCTTCTCCTAGACTCCGAAAAAAATGCTTCCAGTAATGGATCCTCATTATTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTACATGTTGCTGCAAAGGTGGAGAGCATTCACCAGTACATTGAATCTATGAAATCAGCATACCTAGCTGATCAGCGCCGACGAGGGGAGGTGAATGATCCATTTCTAGAGGCTGATCGGCGAGAAACTGCAAGACAAGAAGCAGCCTCCAAAAGAGTTCATCCAACATTACATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGAGCATTGACTGCCCAACAGACCCCTGCAACAACTTCATCTTTGTCAACAGGAAGTGGTTTATCTCTTTTTAGCACACCGGTGTCTTCTGCCCCATCATCTTCTATGTCATCTTTGTTTACAACACCGACAACTCCTGCTCCAGGAGCCTCATGGTTTGCATCATCTAGTGCTACACCTCAAACCTCACTTTTTGGTTCCGCATCATCATCCTTACCTGGTGCCACATCAACTCCCTCTCTGTTCAGTAATGCTACTCCATTGTTTAGTTCAACTCCGGCCGGAGGTTCACTCTTTTCAACTCCGTTTGCTTCAGGTACTCCTACAGGATCAGGAGCGAGCTTTGGGGCTGGATCAAAAAATCCAAGGCCAAAATCCAGAACTGCTCGGCGCTAA 1482 0.3657 MSFSLFSTPQQPQQQQQLFQPQQQQQSPFQHQTNLFQQQQQQQQQFQQQQQQQQFQAQQQQQQQQQQLFLFTNDRTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCNRLYDSSVFNDGFEVDASHIVQELGGIGTAMERQKTLLQELMSVVKDMLRNTEVAVRSFMMLRTRFLHPSGGASSATAPSQTPGTTSSQPTATSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYIGECHQWIEELEQLLLLDSEKNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALTAQQTPATTSSLSTGSGLSLFSTPVSSAPSSSMSSLFTTPTTPAPGASWFASSSATPQTSLFGSASSSLPGATSTPSLFSNATPLFSSTPAGGSLFSTPFASGTPTGSGASFGAGSKNPRPKSRTARR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00533 493 MobiDBLite consensus disorder prediction 459 478 - -
Car08g00533 493 MobiDBLite consensus disorder prediction 316 335 - -
Car08g00533 493 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 4 490 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Car08g00533 493 MobiDBLite consensus disorder prediction 185 206 - -
Car08g00533 493 MobiDBLite consensus disorder prediction 316 357 - -
Car08g00533 493 MobiDBLite consensus disorder prediction 459 493 - -
Car08g00533 493 Gene3D - 223 313 - -
Car08g00533 493 MobiDBLite consensus disorder prediction 1 37 - -
Car08g00533 493 MobiDBLite consensus disorder prediction 340 357 - -
Car08g00533 493 PANTHER NUCLEOPORIN P58/P45 4 490 - -
Car08g00533 493 MobiDBLite consensus disorder prediction 184 206 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00533 68 493 NAC Transcription Factor Family AT4G37130 62.329 2.18e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00533 K14307 - gmx:100776992 648.662