Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00524 ATGGATCTATTGAGTGGAGGTGCTGTTGGAGCTGTGATGGGAGAGATCGTGAAACACGCTATTCAAACAATCAAAAAAGGTCGAGACTTTGGTCCAACACTTGAAAAGAACATAGAAACTTTGAACAATTTGGCCCCTTTGATAGAAGAAATGAAAGAGTACAACGATTTGTTAGATCGACCCAGAGATGAAATAGAGAAGTTAGAGAAACACATAAGAGAGGGTCAAGAGCTTGTAACAAAAAGCAAGAAACTTAATCGATGGAAGTTTCCTTCTTTCCCACGTTACCAATCAAAGCTTCAGAAGAAAGATGAGGCTCTTCAGAGACATTTGTCTGTGAATGTTCAAGTGGAGAATAGAAGGGATTTGATGGAAGTGTTGGGTAAGGTGAATGGAATTCTTGAGATTTTGATGAGAAAGGAGAATTTGGGTCAGTTTAATAATAATAATATTGGGAATCAAATAAAGGGTTTGAATGGTGCTCCTGAAGAGCCTGAATGTTTGGGAATGGTTGAGCCTTTAAATAAGTTGAAGGGTGAATTGCTTAAGGATGGTGTTTCTGTACTTGTTTTGACTGGTTTGGGTGGTTCAGGTAAAAGCACACTTGCTAAGAAGCTTTGTTGGGTTCCACCTATCAAAGACAAGTTTGGCAGAAACATATTCTTTGTTACCGTCTCAAAAACTCCCAACTTGAAGAACATTGTACGGACACTATTTGAATACTGTGGAAGTCGGGTGCCTGAGTTTCAAAGCGATGAAGACGCGATTAACCAATTGGGACGTCTTCTGAGGCAGGTTGGGAGAAGACCAATACTATTAGTGTTGGATGATGTTTGGCCTAGATCAGAAGGCCTTATTGAGAAGTTCAAATTCCAAATATCAGATTATAAGATTTTGGTCACTTCAAGAGTTGCATTTAGAAGATTTGGCACACCATTCCAGTTGGATCCACTTGATCATCATCATGCAGTCTCCCTTTTCCATCACTTTGCTCAATTGAATGACAGCAGTTCATATATGCCTGATAAAAATCTTGTCCATGAGATAGTGAGAGGTTGTAAGGGTTCACCATTAGCGCTTCAGGTCATTGCCGGATCACTTTGTAAGCAGCCTTTTGAGAAGTGGCAAAGTATGAAGGGACGTTTACAAAGTCAATCAATTCTGGAGTCTAATAGCACTGACTTGCTTTGTTACCTTCAACAAAGCTTGGATATATTGGAGGATATCAATGAAAAGGAGTGCTTCATGGATATGGGGCTATTTCCTGAAGACCAGAGGATCCCTGTCACTGTCTTCATTGATATTTGGGCAGAACTGCATAACTTAGATGAAGATGGTACAAATGCAATGGTTATTGTCCATGATTTAACCACCAGGAATTTGATTAATGTCATAGCTACAAGGAAAGTTGCAACAGAAACAGACATGTACTACAATAACCACTATGTCATGCTGCATGATCTCCTCCAAGAACTAGCGATCCTTCAAAGCAAAGAGAAACCGTTTGAAGAGAGAAAAAGACTGATCATTGACTTAAGTGGAGATAATCGTCCTGATTGGTGGATAGGACAGAATCAACAAGGAGTCATTAGTCGTATGTACTCATCCATCGCCGGAATGTTGGTTAAACAGAATCAGCTAAAGGTTGCTGCCCGCATATTGTCTATATCAACTGATGAAACATTTTCTTCAGATTGGTGTGACATGCAACCTGATGAGGCTGAGGTTCTGGTTTTAAATATCCGGTCCGACAATTACTCGTTACCGGATTTCACCAATAAAATGAGTAAACTGAAAGTTTTAATAGTCACAAATTATGGTTTCCATCGTTCCGAACTAACCAAATTTGAGCTACTTGGTTTTTTATCAAACTTGAAAAGAATAAGGTTGGAGAAAGTTTCAGTCCCTTCCCTGTGCAGATTGAAGAATCTGCGAAAATTGTCCCTTCATATGTGCAATACAACGCATGCTTTTGAAAGCTGGTCTATCCAAATTTCAGAAGCTATGCCAAATCTAGTGGAAATGAGCATTGACTATTGTAGTGATTTGATTAAATTACCTGATGGTTTTTGCAACATTACCTCATTGAAGAAGCTCAGTATCACAAACTGCCATAAGTTTTATGTAATGCCTCAAGATATTTCAAAGCTGGAGAATTTAGAAGTGTTAAGGCTTTGTTCCTGTTCTGATTTAGTAGAGATATCGGAATCGGTTGGAGGCCTTAAAAAGCTGCGATGTCTCGATATCTCAGACTGCGTGAATCTTCCGAAATTACCGAACGATATCGGTGACTTGGAAAAACTTGAGAAGCTCTACATGAAGGGTTGCTCAAACTTAAGTGAATTGCCTTACTCTGTCCTCAGTTTTGCAAATTCAAAGCATGAAATATATGTGATCTGTGATGAAGAAGGAGCTGAATTATGGGAAATATTTTCATACATTCCTAATCTAAAGATTAAGATGCCTAAAGTTGATATTAACCTAAACTGGCTTCATGGAACTCGTTCATGA 2511 0.3891 MDLLSGGAVGAVMGEIVKHAIQTIKKGRDFGPTLEKNIETLNNLAPLIEEMKEYNDLLDRPRDEIEKLEKHIREGQELVTKSKKLNRWKFPSFPRYQSKLQKKDEALQRHLSVNVQVENRRDLMEVLGKVNGILEILMRKENLGQFNNNNIGNQIKGLNGAPEEPECLGMVEPLNKLKGELLKDGVSVLVLTGLGGSGKSTLAKKLCWVPPIKDKFGRNIFFVTVSKTPNLKNIVRTLFEYCGSRVPEFQSDEDAINQLGRLLRQVGRRPILLVLDDVWPRSEGLIEKFKFQISDYKILVTSRVAFRRFGTPFQLDPLDHHHAVSLFHHFAQLNDSSSYMPDKNLVHEIVRGCKGSPLALQVIAGSLCKQPFEKWQSMKGRLQSQSILESNSTDLLCYLQQSLDILEDINEKECFMDMGLFPEDQRIPVTVFIDIWAELHNLDEDGTNAMVIVHDLTTRNLINVIATRKVATETDMYYNNHYVMLHDLLQELAILQSKEKPFEERKRLIIDLSGDNRPDWWIGQNQQGVISRMYSSIAGMLVKQNQLKVAARILSISTDETFSSDWCDMQPDEAEVLVLNIRSDNYSLPDFTNKMSKLKVLIVTNYGFHRSELTKFELLGFLSNLKRIRLEKVSVPSLCRLKNLRKLSLHMCNTTHAFESWSIQISEAMPNLVEMSIDYCSDLIKLPDGFCNITSLKKLSITNCHKFYVMPQDISKLENLEVLRLCSCSDLVEISESVGGLKKLRCLDISDCVNLPKLPNDIGDLEKLEKLYMKGCSNLSELPYSVLSFANSKHEIYVICDEEGAELWEIFSYIPNLKIKMPKVDINLNWLHGTRS 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00524 836 Gene3D Ribonuclease Inhibitor 550 798 IPR032675 -
Car08g00524 836 PRINTS Disease resistance protein signature 188 203 - -
Car08g00524 836 PRINTS Disease resistance protein signature 265 279 - -
Car08g00524 836 PRINTS Disease resistance protein signature 353 367 - -
Car08g00524 836 PRINTS Disease resistance protein signature 739 755 - -
Car08g00524 836 Pfam NB-ARC domain 173 401 IPR002182 GO:0043531
Car08g00524 836 Coils Coil 51 71 - -
Car08g00524 836 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 129 IPR008808 -
Car08g00524 836 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Car08g00524 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 417 IPR027417 -
Car08g00524 836 Gene3D - 399 495 IPR036388 -
Car08g00524 836 Gene3D - 149 308 IPR027417 -
Car08g00524 836 Gene3D - 318 398 IPR042197 -
Car08g00524 836 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 822 IPR039203 GO:0050832
Car08g00524 836 SUPERFAMILY RNI-like 587 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00524 Car-Chr8 4467507 4471964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00524 193 799 WRKY Transcription Factor Family AT5G45050 23.653 8.21e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00524 - - gmx:100792590 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00524 08 4467507 4471964 Car07g01472 07 14148536 14153101 PCT