Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00523 ATGGCGACCGGAGTAGGTATGGAGTTGCCGATCATGCACGACAGTGACCGTTACGACTTCGTTCGTGATATTGGCTCAGGGAATTTCGGCGTCGCGAGACTCATGAGGGATAAGCACACTAAAGAGCTTGTTGCTGTTAAGTATATCGAACGTGGAGATAAGATTGATGAAAATGTTAAGAGAGAAATAATCAATCACAGGTCTCTGAGACATCCTAATATTGTGAGGTTTAAGGAGCTCATtttaacacctacacatctggcaattgtaatggaatatgcatctggaggagaaatgtttgaacgaatcagcaaagcggggcggtttactgaggacgagGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGTTATTGTCATTCAATGCAAGTATGTCATCGGGACCTGAAGTTGGAAAACACTTTGTTGGATGGAGACCCCGCACTTCATTTGAAAATTTGTGATTTTGGATACTCCAAGTCTTCGGTGCTTCATTCACAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAATACTGCAGAAGCAAGAGTATGATGGAAAGATTGCAGATGTCTGGTCATGTGGGGTAACCTTATATGTGATGCTTGTGGGATCATATCCATTTGAAGATCCCGATAATCCAAGGGATTTCCGGAAGACAATTCAGAGGGTTCTCAATGTACAGTATTCCGTTCCAGACTTCATTCAAATATCTCCTGATTGTCGCGACCTTATATCAAGAATCTTTGTTTCTGACCCTTCAGAGAGAATCACCATTCCAGATATAATGAAAAATGAATGCATTGATACAATCATGCAGATAATTTCAGAAGCTACTGTACCAGCAGCTGGGAGCTATTCTTTAGACTGGATTGTGGCTGATGACCTTGACATGGATGATGATATGGATGATATAGACTCTGACTATGAACTTGATGTAGATAGCAGTGGAGAGATTGTATATGCCATATAA 990 0.3727 MATGVGMELPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKELILTPTHLAIVMEYASGGEMFERISKAGRFTEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGDPALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEILQKQEYDGKIADVWSCGVTLYVMLVGSYPFEDPDNPRDFRKTIQRVLNVQYSVPDFIQISPDCRDLISRIFVSDPSERITIPDIMKNECIDTIMQIISEATVPAAGSYSLDWIVADDLDMDDDMDDIDSDYELDVDSSGEIVYAI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00523 329 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Car08g00523 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Car08g00523 329 SMART serkin_6 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00523 329 ProSiteProfiles Protein kinase domain profile. 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00523 329 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 10 272 - -
Car08g00523 329 PANTHER SERINE/THREONINE KINASE 273 323 - -
Car08g00523 329 PANTHER SERINE/THREONINE KINASE 10 272 - -
Car08g00523 329 SUPERFAMILY Protein kinase-like (PK-like) 11 285 IPR011009 -
Car08g00523 329 Gene3D Transferase(Phosphotransferase) domain 1 94 278 - -
Car08g00523 329 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 273 323 - -
Car08g00523 329 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00523 329 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00523 Car-Chr8 4462276 4466248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00523 17 270 CBL-interacting serine-threonine protein kinases AT5G25110 43.657 9.97e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Car08g00523 Pkinase 3.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00523 K14498 - gmx:100783967 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00523 08 4462276 4466248 Car08g00523 08 4462276 4466248 ECH
Car07g01470 07 14124853 14129828 Car08g00523 08 4462276 4466248 PCT