Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00517 ATGCGTTGGTTGCCAActcttattttctctccttcttctcattctcaatcttctaacccttcttcttcttcttcatctccttcaacttctGACCCTTCCGATCCTAGAAAGAACACGCGCGGCACGTGGTTTTTCGGTAACGGTAAAAAATCTACGCGCTCAAGGAAGTTACGTCACGTCGACGATGATCATTCCGAATACGACGTCGTTGCGCCTCCTATTTCTCGTTCTCCAAGCGCACGTTCCTACATTCGCTCCAATACCTCTTCCTCTGTCGCGCCTCAGCCGTTGCCATTGCCGGAGCTAGCTTCTCCCGCCGCGTTGCTTCGCCAGAGAGATGCAGTTCGTTTGCCGTCGCCTAAAGAGGCTAACGGCAAAGCCTTAGAACACGATGTCGCTGCCGTCGTCGGTTCTCTTCCGACTGGCTTTAAGATGCGCAGTGTTTTTGCTAGCCAAGAGACAAGAAGGAATATGGAGCATATGGATACAAAGCCACCAGGGAATATGATGGTGCGTCAAAATACAAGTGGTGATGCAACTCCAAGCTTTCGAGGAAATAGCTTCGAGATCAGTGTACCCCCAAGGAGTGCTCCATGCAGTCCCTTTACCAGTCCCTCAATCAGCCCAAACAACCCCAAGAATGATGATTTTGTGCCATATTATTATGTGTCACCTAAAGCCAATCAGTTCTGGTCTGCACCAGAATTTCCCACATCTACCGGGCAACCACCTCCTGCTTTCTTTGATTTATCTGCATTAGGCATTGATTGTGCCACTTCTCCCCATCAGAGTTCTGGAGGAAGAAGTCCTATACAACAAAACCCCAAAAGCCCAACTAGACCTTCTTCACCATTACCTAGATTATCCCTTGACACCCCAACAACTTCACGTCGTGAAAGTCTTGGTCTTCCTCTCACTGTTCATCCTTTACCCTTGCCTCCTTGGCCTGGGACTTCCTTACCTTCACCCTCTTCTGCCTATTCCCAACCTGGGGTGGCTAAGACAGAATCCTTATCTATGAAAAGCCAATGGCAAAAGGGTAAACTTATTGGCCGAGGTACTTTTGGAAGTGTTTATGTTGCCACCAATAGAGAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAATATTTTCTGATGATCCAAAATCTGCAGAGAGTATAAAGCAGTTAGAACAGGAGATTAAAGTTCTTAGCCAACTGAAACATCCAAACATTGTGCAGTATTACGGTAGTGAAATAGTAGGAGACAAGTTTTATATTTACTTGGAATTCATCCATCCTGGTTCAATAAACAAATATGTTCGTGATCACTGTGGCGCAATAACAGAGTCTGTGGTTCGGAATTTCACACGGCATATTCTTTCCGGGTTGGCTTACTTGCACAGCAAAAAGACAATTCATAGGGATATCAAGGGGGCTAACTTGCTTGTTGATTCCTCTGGTGTTGTTAAGCTTGCTGATTTTGGGATGGCCAAGCATCTAACTGGGCATTCTGCTGATCTGTCTCTGAAAGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAAGCAGTCATACATAAAGATAACAGCTCTGATCTAGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTCACGGGGAAGCCTCCTTGGAGTGAATATGAAGGAGCGGCAGCTATGTTCAAGGTAATGAAAGATACCCCTCCTATACCAGAAACGTTGTCATCAGAGGGTAAAGATTTCTTGAGGCTTTGTTTTAAAAGAAATCCAGCTGAACGACCCACTGCTTCTATGTTATTAGAGCATCGGTTTCTGAAAAACTCACAACAGTCAGATCTTTCATCTTCATGTCATCTGTATAATGGAATAACCTCAATGATTGCCAAAGGGAAATCTGCTACTGATAGTGGCATGGCAATGTCCTACTCACTCTACTCTTGA 1941 0.4333 MRWLPTLIFSPSSHSQSSNPSSSSSSPSTSDPSDPRKNTRGTWFFGNGKKSTRSRKLRHVDDDHSEYDVVAPPISRSPSARSYIRSNTSSSVAPQPLPLPELASPAALLRQRDAVRLPSPKEANGKALEHDVAAVVGSLPTGFKMRSVFASQETRRNMEHMDTKPPGNMMVRQNTSGDATPSFRGNSFEISVPPRSAPCSPFTSPSISPNNPKNDDFVPYYYVSPKANQFWSAPEFPTSTGQPPPAFFDLSALGIDCATSPHQSSGGRSPIQQNPKSPTRPSSPLPRLSLDTPTTSRRESLGLPLTVHPLPLPPWPGTSLPSPSSAYSQPGVAKTESLSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEAEIFSDDPKSAESIKQLEQEIKVLSQLKHPNIVQYYGSEIVGDKFYIYLEFIHPGSINKYVRDHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGHSADLSLKGSPYWMAPELMQAVIHKDNSSDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSSEGKDFLRLCFKRNPAERPTASMLLEHRFLKNSQQSDLSSSCHLYNGITSMIAKGKSATDSGMAMSYSLYS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00517 646 Pfam Protein kinase domain 345 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00517 646 MobiDBLite consensus disorder prediction 55 69 - -
Car08g00517 646 SUPERFAMILY Protein kinase-like (PK-like) 336 619 IPR011009 -
Car08g00517 646 MobiDBLite consensus disorder prediction 283 301 - -
Car08g00517 646 Gene3D Transferase(Phosphotransferase) domain 1 340 635 - -
Car08g00517 646 ProSiteProfiles Protein kinase domain profile. 344 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00517 646 SMART serkin_6 344 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00517 646 MobiDBLite consensus disorder prediction 257 276 - -
Car08g00517 646 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Car08g00517 646 MobiDBLite consensus disorder prediction 79 95 - -
Car08g00517 646 MobiDBLite consensus disorder prediction 8 37 - -
Car08g00517 646 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 627 - -
Car08g00517 646 MobiDBLite consensus disorder prediction 1 99 - -
Car08g00517 646 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 627 - -
Car08g00517 646 MobiDBLite consensus disorder prediction 257 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00517 Car-Chr8 4387470 4392837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00517 1 624 MAP Kinase Kinase Kinase AT5G66850 54.341 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car08g00517 Pkinase 3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00517 - - cam:101502514 1173.69