Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00515 ATGGGTCTTTGCACTTCGAAACCCTCTTCAAATCCCACTCACTCCTCTCGCAAATTCAACACTGAACTTCCTCAACCAAACTCCGTCACTTCCCAACCTCTAACTAACTCCGTCAATGGCCAAAACCCTAACGAAACCGAAAACGGTAACAGATCTCCGTTTTTCCCGTTCTACAGTCCTAGTCCGGCGCACAATTTTTTCTCCAAGATGTCTCCGGCGAGGAAATTTTTCAAGAAGCCGTTTCCTCCTCCGTCTCCGGCGAAGCATATAAGATCTCTTTTGGCTCGGAGGCATGGCTCCGTGAAGCCTAATGAAGCTTCGATACCGGAAGGCGCTGAAGCGGAGCCGGTGGCTGCTCTTGACAAGAACTTCGGATTCTCCAAGCATTTTGGAAATAAATATGATGTTGGAGATGAGGTTGGGAGAGGCCATTTTGGTTACACTTGTGAAGCTAAATTGAAGAAAGGAGATCTTAAAGGCCAACAAGTTGCTGTGAAAGTGATTCCTAAAGCCAAGATGACTACTGCTATTGCTATTGAGGATGTGAGAAGGGAAGTGAAAATTTTGAGAGCTTTGAATGGACACAAGAATGTAGTACGATTTTATGAGGCTTATGAAGATCATGATAATGTCTATATAGTAATGGAATTGTGCGAAGGTGGAGAGTTGTTGGACAGAATATTATCAAGAGGTGGGAAATACACAGAGGAAGATGCAAAAGCCATTCTGAGACAAATACTGAATGCTGCTGCATTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCAGAGAACTTCTTGTTCGCATCCAAGGACGAGAACTCAGAACTGAAGGCCATAGACTTTGGGCTGTCGGATTTTGTTAAACTAGATGAAAAGCTCAATGATATTGTTGGTAGTGCATACTATGTGGCTCCTGAAGTTCTACATAGAGCTTATAGTACAGAGGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGTGGCAGCCGTCCGTTTTGGGCTCGGACTGAGTCTGGTATCTTTCGTACTGTATTGAAAGCTGATCCAAGTTTTGACGAACCTCCTTGGCCTTCTCTCTCAGATGAGGCAAGGGATTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAAAGAATGAGTGCAGCACAGGCATTAAGTCATCCATGGATTAAAAACCACAAGGATGCAAAAGTACCTTTGGATATTTTAATATTCAAGCACATGAAGGCATACATGCGTTCTTCATCTCTACGAAAAGCTGCTTTAAGGGCTCTATCGAAGACATTAACTGTAGATGAACTACATTACTTGAAGGAGCAGTTTGCACTTTTAGAGCCTAACAAATATGGCACCATAAGCTTGGAAAATATAAAAGCGGCCTTTATGGTAAATGCAACAGATGCTATGAAGGAGTCACGCATTGCTGACTTTCTGGGATCACTTAATGCATTGCAATATAGAAGGATGGATTTTGATGAGTTTTGCGCAGCTGCACTCAGTGTTCATCAACTTGAAGCAATTGACCACTGGGAGAAGCGTGCACGTTGTGCCTATGATCTGTTTGAAAAGGATGGAAACAAGGCCATAGTCATTGATGAATTAGCTTCGGAGCTTGGGCTTGGTCCATCTATCCCTGTTCATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGGAAGTTAAGCTTCCTTGGATTTGTGAAATTGTTGCATGGCCCATCAAGAAGTCTTGCAAAAGCTCAATAG 1764 0.4274 MGLCTSKPSSNPTHSSRKFNTELPQPNSVTSQPLTNSVNGQNPNETENGNRSPFFPFYSPSPAHNFFSKMSPARKFFKKPFPPPSPAKHIRSLLARRHGSVKPNEASIPEGAEAEPVAALDKNFGFSKHFGNKYDVGDEVGRGHFGYTCEAKLKKGDLKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHKNVVRFYEAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAILRQILNAAAFCHLQGVVHRDLKPENFLFASKDENSELKAIDFGLSDFVKLDEKLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEPPWPSLSDEARDFVKRLLNKDPRKRMSAAQALSHPWIKNHKDAKVPLDILIFKHMKAYMRSSSLRKAALRALSKTLTVDELHYLKEQFALLEPNKYGTISLENIKAAFMVNATDAMKESRIADFLGSLNALQYRRMDFDEFCAAALSVHQLEAIDHWEKRARCAYDLFEKDGNKAIVIDELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00515 587 Gene3D Transferase(Phosphotransferase) domain 1 223 414 - -
Car08g00515 587 Pfam Protein kinase domain 134 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00515 587 ProSiteProfiles Protein kinase domain profile. 134 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00515 587 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Car08g00515 587 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 582 - -
Car08g00515 587 Gene3D Phosphorylase Kinase; domain 1 127 222 - -
Car08g00515 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Car08g00515 587 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 37 582 - -
Car08g00515 587 Gene3D - 421 575 - -
Car08g00515 587 MobiDBLite consensus disorder prediction 1 55 - -
Car08g00515 587 CDD STKc_CAMK 133 395 - -
Car08g00515 587 Gene3D - 415 505 - -
Car08g00515 587 SUPERFAMILY EF-hand 424 578 IPR011992 -
Car08g00515 587 SUPERFAMILY Protein kinase-like (PK-like) 131 424 IPR011009 -
Car08g00515 587 SMART serkin_6 134 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00515 Car-Chr8 4363258 4367152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00515 1 587 EF-hand Containing Proteins AT3G50530 72.871 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car08g00515 Pkinase 5.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00515 K00924 - gmx:100794177 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00515 08 4363258 4367152 Car08g00515 08 4363258 4367152 ECH
Car07g01461 07 14042474 14046591 Car08g00515 08 4363258 4367152 PCT