Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00491 ATGAACTGGGTTCGCGGTCCCTCACTAGGCAGTGGAACCTTTGCCACCGTCGACTTAGCTATACACACACAACACTCCGTTAACTTTCCGTCTCTTACCGCCGTCAAATCCGCTTATGCTTACAATTCTTATTATCTCCTAAACGAGAAACATATACTCGATCGTTTAGGATCTTCCCCATTTATTGTCAAGTGTTTTGGCCACGATCAAACTCTTGAAAACGGCGTAAAATTTTATAATATTTTTCTAGAGTATGCCGCCGGTGGAACACTCTCCGATCAGCTCAAGAATCACGGCGGTAAGTTCCCCGAAACTCTCGTTCGCCGTTACACCAAGTCTATTGTCAAAGGACTTAAACACATTCACGAAAATGGTTTTGTTCATTGCGACTTGAAGCTACAAAACATTCTTGTATTCGACGATGACAACATTAAAATTTCGGATTTTGGTCTTTCAAAAGCGAAAGGATTAAAACTTTGTGAAAACTGGGAGTGCAGAGGAACTCCTATGTTTATGTCACCAGAATCAGTGAACGATAATGTGTATGAGTCTCCGACTGATATCTGGGCACTTGGCTGCACCGTCGTTGAGATGGTTACCGGAAAATCAGCATGGAATGTGGGTGATAATGATAATATTTGGTCGTTGTTTGTTCGAATTGGGATTGGAGAAGAATTGCCGTTGATTCCGAATGAATTATCAGATGAAGGAAAAGATTTTCTTGAAAAGTGTTTTGTTAAGGATCATTTAAAAAGATGGAATGCTGAAATGCTTTTGAAACATCCTTTTATTTTCGAGGATGATGAAACTATTTCATCGTCATCGTCTGATAGTGGCGAGTCTGACGATGAAATTATTTTCACCATCTCGGATAACCAACTTCGATTTTCTTTCAATGGGCTTTTTCAGTTTTAA 915 0.3989 MNWVRGPSLGSGTFATVDLAIHTQHSVNFPSLTAVKSAYAYNSYYLLNEKHILDRLGSSPFIVKCFGHDQTLENGVKFYNIFLEYAAGGTLSDQLKNHGGKFPETLVRRYTKSIVKGLKHIHENGFVHCDLKLQNILVFDDDNIKISDFGLSKAKGLKLCENWECRGTPMFMSPESVNDNVYESPTDIWALGCTVVEMVTGKSAWNVGDNDNIWSLFVRIGIGEELPLIPNELSDEGKDFLEKCFVKDHLKRWNAEMLLKHPFIFEDDETISSSSSDSGESDDEIIFTISDNQLRFSFNGLFQF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00491 304 Pfam Protein kinase domain 7 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00491 304 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 276 - -
Car08g00491 304 SUPERFAMILY Protein kinase-like (PK-like) 3 272 IPR011009 -
Car08g00491 304 CDD STKc_MAPKKK 2 264 - -
Car08g00491 304 SMART serkin_6 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00491 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Car08g00491 304 ProSiteProfiles Protein kinase domain profile. 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00491 304 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 276 - -
Car08g00491 304 Gene3D Transferase(Phosphotransferase) domain 1 2 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00491 Car-Chr8 4124700 4125614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00491 1 270 MAP Kinase Kinase Kinase AT4G36950 56.410 4.45e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car08g00491 Pkinase 3.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00491 - - gmx:100797177 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00491 08 4124700 4125614 Car08g00491 08 4124700 4125614 ECH