Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00490 ATGAATTGGGTTCGCGGTCACTCACTAGGCAGTGGAACCTTTGCCACTGTCGACTTAGCTATACACACACAACACTCCGTTAACTTTCCGTCTCTCACTGCCGTCAAATCCACCTATCTTTACAATTCTTATTCTCTCCTAAACGAGAAACACATACTCGATCGTTTAGGATCTTCCCCTTTTATTGTCAAGTGTTTTGGCCACGATCAAACTCTTGAAAACGGCGTAAACTTTTATAATATTTTTCTAGAGTATGCCGCCGGTGGAACACTCTCCGATCAGCTCAAGAATCACGGCGGTAAGTTCCCCGAAACTCTCGTTCGCCGTTACACCAGGTCCATTGTCAAAGGACTTAAACACATTCACGAAAACGGTTTTGTTCATTGCGACGTGAAGCTACAAAACATTCTTGTATTCGACAATGACAACGTTAAGATTTCGGATTTCGGTCTTTCAAAGAAGAAAGGATTAAAACAGGGAGAAAAGTGGGAGTTGAGAGGAACTCCGATGTTTATGTCGCCGGAATCGGTGAACGATAATGTGTATGAGTCTCCGGCGGATATATGGGCACTTGGTTGCACCGTCATGGAGATGGTTACAGGAGAACCAGCATGGAATATGAGTGATAATGAGAATATTTGGTTGTTGTTAGTTCGAATTGGAATCGGAGAAGAATTACCGTTGATTCCAGATGAATTATCAGATGAAGGAAAAGATTTTCTTGAAAAGTGTTTTGTTAAAGATCCTTTGAAAAGATGGAGTGCTGAAATGCTTTTGAAACATCCTTTTATTTTCGAAGATGATGAAACTATTTCATCGTTGGAGACTGACGTGTCCAACAATGAAAGAGTTTTATTAGAGAAAGAATTACTTGATAAATCTTTATCATTGTCACCGTCTCCAACAACCCAATTTGATTTTCCTCAATGGATTTCTTCAAGTGTAACAACTGTTTCGACAATGCCTCCAAATTTAAATGAATCAAAATTTAAACATGGTTTTGCTTCACCAGAGGAGAGACTACGGCTACTAGTCACAGAACAGAGACCGTTAGATTGGTCAGAATCAGATGAATGGCATTTTGTTCGGTCAAATTAG 1098 0.3998 MNWVRGHSLGSGTFATVDLAIHTQHSVNFPSLTAVKSTYLYNSYSLLNEKHILDRLGSSPFIVKCFGHDQTLENGVNFYNIFLEYAAGGTLSDQLKNHGGKFPETLVRRYTRSIVKGLKHIHENGFVHCDVKLQNILVFDNDNVKISDFGLSKKKGLKQGEKWELRGTPMFMSPESVNDNVYESPADIWALGCTVMEMVTGEPAWNMSDNENIWLLLVRIGIGEELPLIPDELSDEGKDFLEKCFVKDPLKRWSAEMLLKHPFIFEDDETISSLETDVSNNERVLLEKELLDKSLSLSPSPTTQFDFPQWISSSVTTVSTMPPNLNESKFKHGFASPEERLRLLVTEQRPLDWSESDEWHFVRSN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00490 365 Pfam Protein kinase domain 5 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00490 365 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 323 - -
Car08g00490 365 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 323 - -
Car08g00490 365 SUPERFAMILY Protein kinase-like (PK-like) 3 315 IPR011009 -
Car08g00490 365 CDD STKc_MAPKKK 2 264 - -
Car08g00490 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Car08g00490 365 ProSiteProfiles Protein kinase domain profile. 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00490 365 SMART serkin_6 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00490 365 Gene3D Transferase(Phosphotransferase) domain 1 2 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00490 Car-Chr8 4119947 4121044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00490 1 363 MAP Kinase Kinase Kinase AT4G36950 49.864 1.85e-117 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car08g00490 Pkinase 2.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00490 - - gmx:100797177 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00490 08 4119947 4121044 Car07g01437 07 13644157 13645214 PCT