Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00481 ATGGCGTCGATGCCTCCGCCTCTGCCTTCGCCGTCTTCGTCTAGATCCGAGCCTCATCTCGATCCCTTCACAAAGAAAGTGGAGGAAGACACAAGTCCTGCAGTTCAAGATGTGTTATCGGCTATTGATTCTTTAAAGAAACAAGTTGTTGCTGAACGGATTGTTACCGTCAAGAAAAGAGTGGAGGAAAATAGACAGAAGCTGGTTGGTATCACCAACTGTCTCTGGAAATCGGCGGCGGAGAGAAGGACATGTGGTGTTGCCGATACGATTAGAAGTCTTGACCTGCTGACTAAGAGGCAAAAAGATGCAGTTGATATGCACAACGGTGTTTGTGGTGGTAACGATGATAAGGAGAGCAATGGCTATCATGGAGACGACCATGGTTCTACGGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTTCGGCCTATCAAATTACCCGAAGTTAAAAGATTGCCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAATCAGTTGTAGGTCGGAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTCATTTGCAGTGACAGTGAGGAGGAAATAATTGATGAAGAAGAGGAAAAAAGAGAATTTGTACAATCAGAAGATTTTATACTTCGCATGACTATCAGAGAATTTGGTTTATCTGATGCTGTTTCAGAGACACTGGCTCAGTGTTTTTCTAGAAAAGCTAGTGACATTAAGGCCCGATATGAAACTCTTTGCAATGATGACAATGCTGGCGGGGATTCTAAAAATGGGGATATAGAAGATAATTCCCAAAGTGACAATTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGTCGCCGTTGTCGTGTTTTCGATTGCAGATTACATGGATGCTCTCAGGATCTTGTCTTCCCAGCTGAGAGACAAACTTTGTGGATCCCTCCTAACACCGAAAATGCACCATGTGGACCAAATTGTTTCAGATCGGTACTTAAGTCCGAAAAATTTGCCAAAGTTACATCTTCTCAGACTGATGTTGAAGACAAATCTTCTGGTGGTGCTCTATCTAGGAAAAAAAATTCTGGTAGAAGGCTGATAAAATGCAGCCAAAGTGAAAGTGCTTCATCTAATGCTAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGGCGGGATGCTGTTTCAGCCTCCCGCTCGGCCCCACCTAAAACTAAACCAGTGGGGAAAAGTGGAGTTGGTAAGAGAAACAGTAAGAGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAACAGTAGCTTCTGATTCTGATTCCAAAAGTGAAGCTCATGACCACTCATTGAATGATATGGTATCGGATCCACATGTTGTGACCGAGGAAGACAACACGAGGAAAGAAGAGTTTGTGGATGAGAACATTTGTAAACAAGAATTGACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGTCTTTTAGAAAAAGGAATGGAAATTTTTGGCAAAAACAGCTGCTTAATAGCCAGGAATCTCTTAAATGGTCTTAAGACATGTTGGGATGTTTTCCAATACATAAATTGTGAAGAAGGGAAGTTGTCTGGTTCTACTGGGGATGCTACGAATGCTCTCGTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGAAGAAGGTCAAGATTTTTACGTAGAAGAGGAAGAGTCCGTCGTTTGAAGTATACCTGGAAATCTGCCGCTTATCATTCAATAAGAAAAAGGATTACTGAGAGAAAGGATCAGCCCTGCCGACAGTACAATCCGTGTGGATGCCAAACAGCTTGTGGAAAGCAGTGTTCGTGTCTTCAAAACGGAACCTGCTGTGAGAAGTACTGTGGATGCCCAAAGAGTTGTAAAAATCGATTCCGTGGATGTCATTGTGCAAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGGGAATGCGATCCAGATGTTTGTAGGAACTGTTGGGTCAGCTGTGGCGATGGTACTCTTGGGATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAACAACAGAAGGTTCTTCTTGGAAGGTCTGATGTGTCTGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAATTAATTTCTCATAGGGAAGCAGATAAACGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTATCGAAAGGGTGATAAATTGAAGTTTGCGAACCACTCTCCTGTTCCAAATTGTTATGCAAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGAATTTTTGCCAAGGAACGGATTAACGCTGGGGAGGAGCTATTTTATGATTACCGTTATGAGCCAGATAGAGCTCCTGCTTGGGCTCGGAAGCCTGAGGCATCTGGATCGAAAAAAGATGACAATGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2592 0.4228 MASMPPPLPSPSSSRSEPHLDPFTKKVEEDTSPAVQDVLSAIDSLKKQVVAERIVTVKKRVEENRQKLVGITNCLWKSAAERRTCGVADTIRSLDLLTKRQKDAVDMHNGVCGGNDDKESNGYHGDDHGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIDEEEEKREFVQSEDFILRMTIREFGLSDAVSETLAQCFSRKASDIKARYETLCNDDNAGGDSKNGDIEDNSQSDNSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQTLWIPPNTENAPCGPNCFRSVLKSEKFAKVTSSQTDVEDKSSGGALSRKKNSGRRLIKCSQSESASSNAKNISESSDSENGPGRDAVSASRSAPPKTKPVGKSGVGKRNSKRVAERVLVCMQKRQKKTVASDSDSKSEAHDHSLNDMVSDPHVVTEEDNTRKEEFVDENICKQELTDNKSWKALEKGLLEKGMEIFGKNSCLIARNLLNGLKTCWDVFQYINCEEGKLSGSTGDATNALVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQTACGKQCSCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPVPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKDDNAPSSGRAKKLA 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00481 863 MobiDBLite consensus disorder prediction 378 406 - -
Car08g00481 863 CDD SET_EZH 714 830 - -
Car08g00481 863 ProSiteProfiles SET domain profile. 714 829 IPR001214 GO:0005515
Car08g00481 863 MobiDBLite consensus disorder prediction 838 863 - -
Car08g00481 863 Pfam SET domain 725 828 IPR001214 GO:0005515
Car08g00481 863 Gene3D SET domain 614 831 IPR046341 -
Car08g00481 863 SUPERFAMILY SET domain 588 834 IPR046341 -
Car08g00481 863 MobiDBLite consensus disorder prediction 838 856 - -
Car08g00481 863 SMART CXC_2 648 685 IPR033467 -
Car08g00481 863 Coils Coil 196 216 - -
Car08g00481 863 SMART set_7 714 835 IPR001214 GO:0005515
Car08g00481 863 MobiDBLite consensus disorder prediction 1 31 - -
Car08g00481 863 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 457 861 - -
Car08g00481 863 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 20 457 - -
Car08g00481 863 MobiDBLite consensus disorder prediction 350 431 - -
Car08g00481 863 ProSiteProfiles CXC domain profile. 600 699 IPR026489 -
Car08g00481 863 Pfam CXC domain 652 683 IPR041355 -
Car08g00481 863 MobiDBLite consensus disorder prediction 445 467 - -
Car08g00481 863 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 863 IPR025778 GO:0031519
Car08g00481 863 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 457 861 IPR045318 GO:0006338|GO:0018024
Car08g00481 863 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 20 457 IPR045318 GO:0006338|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00481 Car-Chr8 4042238 4053052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00481 703 832 C2H2 Transcription Factor Family AT2G23740 27.891 1.04e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car08g00481 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00481 - K11430 gmx:100799832 1497.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00481 08 4042238 4053052 Car08g00481 08 4042238 4053052 ECH