Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00468 ATGGAACCGGCATCTGTAACTCCTCCAGCTTCGAGGACTGAACATTACTCCACCAAAGTATCTGCTGAAAATGGCAATGCACATCCTTCAGATTCAGATTCACCATCCTTGTTACCAGAAGCTGGTATATCTTCCTGGGCAAGAAATCTGAAATTGAACCAGTCCCCTGGGATTGGTGCAGCAGATCAGAACTCACAGACTGAGAACAGTGGGATGTCGGCATTTGCTCGTCTGACTAGTGGGATTGGACTACGTGTTCCCTCAAATGAGACTGCTACGACCAATTCGGGAGCTGAGCAACCTAATTTAATTGAGTCATTCACCAAAGGGTTGATGGATTCTTCCAAGAGTGCAGTAAAGGCGGTGCAGACCAAAGCACGCCATATTGTCTCTCAAAATAAACGCAGATACCAGGAAGGTGGATTTGATTTGGATATGACATACATCACTGAAAATATAATATCTATGGGATTTCCTGGTGGTGATTTGAGCTCTGGAATTTTGGGGTACATTGAGGGGTTCTATCGCAATCACATGGAAGAAGTAATCAAGTTTTTTGAAACTCATCATAAGGGAAAGTACAAAGTATACAATCTTTGTTCAGAGAGGTTATACGATGGATCACTTTTCCAGGGCAAGGTTGCAAGTTTCCCATTTAGTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCAAAGTGCATATTCATGGTTGAAGGGGGATATCCAAAATGTGGTAGTTGTTCATTGTAAAGCTGGTATGGGAAGGACAGGACTGATGATTTGTAGTCTTCTTTTGTTTCTTAATTTCTTCCCCACCGCTGAGGAAGCCATTGATTACTTTAACCAGAAAAGATGTGTAGATGGAAAGGCTCTAGTTCTCCCTAGTCAGATTAGATATGTCAAATACTTTGAGCACACTTTAACACACTTCAAAGGAGAAGTCCAGCCTGGACGAAGGTGCATGCTAAGAGGGTTTCGGCTGCACAAATGCCCTTATTGGGTTAGACCATCCATCACAATTTCTGATCATAATGGAATTCTTTTCACAACGAGAAAGCATCCCAAGACAAAGGATCTAATGCCAGAAGATTTCTGGATGAATGCACCCAAGAAAGGAATTGTGGTCTTTGCATTACCAGGAGAGCCTGGTTTGACAGAATTGGTGGGGGACTTCAAAATTCATTTTCATGATCGGCAGGGAGATTTCTTCTGGTTTGTTCGAAACAGCTACTTCTTCTGGCCCCTTTATACTTTAGTTTTTTCCTCTTCAAATTAG 1287 0.4196 MEPASVTPPASRTEHYSTKVSAENGNAHPSDSDSPSLLPEAGISSWARNLKLNQSPGIGAADQNSQTENSGMSAFARLTSGIGLRVPSNETATTNSGAEQPNLIESFTKGLMDSSKSAVKAVQTKARHIVSQNKRRYQEGGFDLDMTYITENIISMGFPGGDLSSGILGYIEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDGSLFQGKVASFPFSDHNCPPIQLIASFCQSAYSWLKGDIQNVVVVHCKAGMGRTGLMICSLLLFLNFFPTAEEAIDYFNQKRCVDGKALVLPSQIRYVKYFEHTLTHFKGEVQPGRRCMLRGFRLHKCPYWVRPSITISDHNGILFTTRKHPKTKDLMPEDFWMNAPKKGIVVFALPGEPGLTELVGDFKIHFHDRQGDFFWFVRNSYFFWPLYTLVFSSSN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00468 428 MobiDBLite consensus disorder prediction 1 40 - -
Car08g00468 428 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 7 409 - -
Car08g00468 428 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 148 314 IPR029021 -
Car08g00468 428 ProSitePatterns Tyrosine specific protein phosphatases active site. 251 261 IPR016130 GO:0016311|GO:0016791
Car08g00468 428 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 7 409 - -
Car08g00468 428 ProSiteProfiles C2 tensin-type domain profile. 321 428 IPR014020 -
Car08g00468 428 SMART PTEN_C2_2 319 426 IPR014020 -
Car08g00468 428 CDD PTP_PTEN 145 308 IPR045101 GO:0016791
Car08g00468 428 Gene3D Protein tyrosine phosphatase superfamily 120 317 IPR029021 -
Car08g00468 428 MobiDBLite consensus disorder prediction 10 39 - -
Car08g00468 428 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 242 288 IPR000387 GO:0016311|GO:0016791
Car08g00468 428 ProSiteProfiles Phosphatase tensin-type domain profile. 135 314 IPR029023 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00468 Car-Chr8 3924415 3930637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00468 27 413 Protein tyrosine phosphatase (PTP) family AT3G19420 71.537 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00468 K01110 - gmx:100801622 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00468 08 3924415 3930637 Car08g00468 08 3924415 3930637 ECH
Car08g00468 08 3924415 3930637 Car04g01474 04 14965607 14971969 PCT