Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00450 ATGGAAACACTTAAGAAGCATTTCATTGTAACTCTTTTTGTTATCCTGTGTGTCTGCGATGTATCATTGGCAAGAACAGAGAAGAGTGAGAATGAAAAGATTACTTACATAGTACATGTTTCCAAATCGATAATGCCAACAAGCTTCGATCACCATTCAATATGGTACAAATCAATTCTTACGTCGATATCTAAGTCAGCTGAAATACTATACACCTACGATAATGCAATGCATGGATTTTCAACAAGTTTAACAGTTGAAGAAGTTGAGTTACTAAAGAGCCAAACCGGGGTTCTAAAGGTGACAGAGGATAAAAAGTACAAACTTCTCACAACTAGAACACCACAGTTTTTGGGGCTCGATAAAATTGATACTATGTTTCCCACGACAAAAAATAGAAGTGATGTAATTGTGGGAATATTAGACACAGGCGTGTGGCCAGAAAGCAAGAGTTTCGATGATACCGGATACGGACCAATCCCGAGTACTTGGAAAGGCAAATGTGAAACTGGTACCAATTTTACAACCTCAAATTGTAATAAGAAATTGATTGGTGCCAGGGTCTTTACAAAGGGCTCCATGGGTTTGATCGAAGATGTTGAatcgccacgagactatgctggccatggaacccacacatcgagtacagctgcaggatctcctgtggaaaacgcgagtcttctcggctatgccaacggaactgcacgtggtatggcaatgggtgctagagttgctatgtataaggtttgctcaacagacgcatgtagcagttctgatatactagctggaatagatcaggccattgccgaccaagtcaatgttctttccttgtcacttggaggtcaagcaattgattacttggaagacagcattgcaatcggagcctttgcagcaatggagcatgggattctagtctcttgcgccgcaggaaattctggtcctacttctatgactgtcaccaatgtagcaccatggattactactgttggagctggcacactcgatcgagaTTTCCCTGCATCCGTCATTCTCGGAAATGGAAAAAATTACTCAGGTGTGTCGCTTTATAAAGGAAGTTCTTTGCCTCGTACACCTGTGCCATTCATATATGCAGGAAATGCAAGTTTTAATGAAGAAGGAGGTCAAGGGCTATGTTTAGAAGGCAGCTTGGTACCAAAAAAAGTATCGGGAAAGATCGTTTTGTGTGATTACGGATCTATTTCTGGTGCTGTGAAAGGAGATATAGTGAAATCTGCTGGTGGTTTGGGTATGGTGCTCGCCAATGTTGTCCCCGATGATGAGGCAGTAAGGGCAATTCCCCATGTTATACCAGCAACTGCTGTAGGCTTCAAAGCTGGAGAAGCAATAAAGAAATACTTGTTTTCTAATCCAAAATCGACAGGTACAATTGTGTTTCAGGGAACAAAGGTCGGGGTTAAACCGTCACCTATTGTTGCAGAGTTCAGTTCACGAGGCCCTAATTTTATAAGCCCACAaatattgaagcctgatttaattgcaccgggtgtaaacatcttagcagcttatccgaggattgtgagtcccagtggtttggggtcagatcaaagacaagttgacttcaacatcatctcaggcacatccatggcatgccctcatgtaagtggattagcggctttgatcaagtcaattcatccaaaatggagcccagccgccatacgatctgcgttgatgacaacTGCTTATAGTAGTTACAAGAACGGTCTCACATTATTGGACCGTGCTAATAATAAGTCAGCTTCACCGTTTGATTTTGGAGCTGGACACGTCGACCCTGTCCTTGCGCTAAATCCCGGACTTGTCTATGATTTAACAGTGGATGACTATTTGAAGTTTCTTTGTGCATCCAACTATGATGATTCTAGTATCGAAATTGTGGTAAGGAGAAAGTATACATGTGACCCAAAGACAAAGTACAGTGTAACAGACCTTAATTACCCCTCATTTGCTGTGGTCTTTGAGAGTGCGAATGGTGTAAAGGAGATTAAATACACACGTACTCTTACCAATGTGGGTGAGGCAGGAACCTACAAGGTATCAATTAAGTCTGATGTTCCATCCGTCAAGATCTTGGTTGAACCAACAGTGTTAAGTTTCAAACAAAATGAGAAAAAATCATACACAGTTACCTTTACTACATCAGGTTCACAAGACACTCCAAGTTTTGGAAGTTTGGAATGGTCAAATGGAAAAACTATTGTTAGAAGTCCTATTGCATTTAGTTGGGATGTATGA 2274 0.2876 METLKKHFIVTLFVILCVCDVSLARTEKSENEKITYIVHVSKSIMPTSFDHHSIWYKSILTSISKSAEILYTYDNAMHGFSTSLTVEEVELLKSQTGVLKVTEDKKYKLLTTRTPQFLGLDKIDTMFPTTKNRSDVIVGILDTGVWPESKSFDDTGYGPIPSTWKGKCETGTNFTTSNCNKKLIGARVFTKGSMGLIEDVESPRDYAGHGTHTSSTAAGSPVENASLLGYANGTARGMAMGARVAMYKVCSTDACSSSDILAGIDQAIADQVNVLSLSLGGQAIDYLEDSIAIGAFAAMEHGILVSCAAGNSGPTSMTVTNVAPWITTVGAGTLDRDFPASVILGNGKNYSGVSLYKGSSLPRTPVPFIYAGNASFNEEGGQGLCLEGSLVPKKVSGKIVLCDYGSISGAVKGDIVKSAGGLGMVLANVVPDDEAVRAIPHVIPATAVGFKAGEAIKKYLFSNPKSTGTIVFQGTKVGVKPSPIVAEFSSRGPNFISPQILKPDLIAPGVNILAAYPRIVSPSGLGSDQRQVDFNIISGTSMACPHVSGLAALIKSIHPKWSPAAIRSALMTTAYSSYKNGLTLLDRANNKSASPFDFGAGHVDPVLALNPGLVYDLTVDDYLKFLCASNYDDSSIEIVVRRKYTCDPKTKYSVTDLNYPSFAVVFESANGVKEIKYTRTLTNVGEAGTYKVSIKSDVPSVKILVEPTVLSFKQNEKKSYTVTFTTSGSQDTPSFGSLEWSNGKTIVRSPIAFSWDV 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00450 757 CDD Peptidases_S8_3 107 575 IPR034197 -
Car08g00450 757 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 23 755 - -
Car08g00450 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Car08g00450 757 SUPERFAMILY Subtilisin-like 109 613 IPR036852 GO:0004252|GO:0006508
Car08g00450 757 Gene3D - 626 755 - -
Car08g00450 757 ProSiteProfiles Serine proteases, subtilase domain profile. 117 609 - -
Car08g00450 757 Gene3D - 335 478 - -
Car08g00450 757 CDD PA_subtilisin_like 341 470 - -
Car08g00450 757 Pfam Peptidase inhibitor I9 35 109 IPR010259 -
Car08g00450 757 Pfam PA domain 385 456 IPR003137 -
Car08g00450 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
Car08g00450 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 755 IPR045051 -
Car08g00450 757 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Car08g00450 757 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Car08g00450 757 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Car08g00450 757 Gene3D Peptidase S8/S53 domain 135 622 IPR036852 GO:0004252|GO:0006508
Car08g00450 757 Pfam Fibronectin type-III domain 656 752 IPR041469 -
Car08g00450 757 Pfam Subtilase family 134 601 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00450 Car-Chr8 3778205 3780478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00450 12 755 Subtilisin-like Serine Gene Family AT5G67360 63.095 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00450 - - gmx:100801866 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00450 08 3778205 3780478 Car08g00450 08 3778205 3780478 ECH
Car08g00450 08 3778205 3780478 Car07g01392 07 13062677 13066523 PCT