Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00448 ATGCCAACAATCTTCAATCACCATTCAATATGGTACCAATCAATTCTTAAGTCGATATCTAACTCAGCAGAAATGCTCTACACCTATGATAATGCAATTCATGGTTTTTCGGCGAGTTTGACAATTGAAGAAGTCCAGTTACTAAAGAGCCAAACCGGGGTTCTAAAGGTGACAATGGATAAAAATTACAAACTTCTCACAACTCGAACCCCAAAGTTCCTTGGGCTCGATAAAATTGCTAATATGTTCCCCACGACAACCATCAGTAGTGATGTAATTGTGGGACTCTTAGACACAGGTGTATGGCCAGAGAGCAAGAGCTTCGACGATACTGGATATGGGCCAATCCCGAGCAGTTGGAAAGGCAAATGTGAAACTGGAAATGCAAGTAGTGATGAAGGAGGAGGTCAAGGGCTATGTTTTCCATACAGCTTGGCACCAGAAAAAGTAGCAGGAAAAATCGTGTTGTGTGATCGTGGAGAAATTTCTAGGGCACAGAAAGGAAACACAGTGAAATCTGCTGGTGGTTTGGGTATGGTGTTGGCCAATGTTGGTACTGGAGAGGAACCAACTGCAGATGTCCATGTTTTGCCAGCAATTTCTGTGGGATTCACAGTTGGAGAAGCGATCAAGAAATACTTGTTTTCTAATCCAAAACCGACAGGTACAATTGTGGTTCAGGGCACAAAAATCGGGATTGAGCCGTCACCTGTTGTTGCACAATTCAGTTCACGAGGCCCCAATTCTATAAACCCACAAATATTGAAGCCTGATTTGATTGCACCGGGTGTAAGTATCTTAGCAGCTTATACTAGGAATAAGAGTCCCACTAGTTTGGATTCAGATCCTAGACGCGTTgatttcaacattatctcaggcacatccatggcatgccctcacgtgagtggactagcggctttgatcaagtcggttcatccagactggagcccagccgccattcgatctgcattgatgacaacTGCTTATACAAATTACAAGAACGGTATGACATTATTGGATAGTGCTAACAATAAGCCAGCAACGCCATTTGATTTTGGGGCTGGACACGTCGATCCTGTTCTTGCGTTAAATCCTGGCCTTGTCTATGATTTAACAGTGGATGACTATTTGTACTTCCTTTGTGCATTGAACTATACAGCTGATGATATTGAAACTATGGCAAGAAGAAAGTATACATGTGACCCAAAGAAAAATTACAGCTTAACAAATCTTAATTATCCTTCCTTTGGTGTGGTCTTTGAGATTGGGAATGGTGTAAAGGAGATTAAACACATGCGAACTCTTACCAATGTGGGTGCTGCAGGAACTTACAAGGTATCAATTAAGTCAGATGCCCCGTCTGTCAAGATCTCAGTTGAACCAAAAGTGATAAGTTTCAAAAAAAATGAGAAAAAATCATACATAATTACATTTACCACATCAAGTTCAAAAAGTGCTCAAAGTTTTGGAAGTTTGGAATGGTCTAATGGCAAAACTATTGTTAGAAGTCCTATTGCATTTAGTTGGAATTTACGGCGAAAAGTCCAAGAATGA 1554 0.3726 MPTIFNHHSIWYQSILKSISNSAEMLYTYDNAIHGFSASLTIEEVQLLKSQTGVLKVTMDKNYKLLTTRTPKFLGLDKIANMFPTTTISSDVIVGLLDTGVWPESKSFDDTGYGPIPSSWKGKCETGNASSDEGGGQGLCFPYSLAPEKVAGKIVLCDRGEISRAQKGNTVKSAGGLGMVLANVGTGEEPTADVHVLPAISVGFTVGEAIKKYLFSNPKPTGTIVVQGTKIGIEPSPVVAQFSSRGPNSINPQILKPDLIAPGVSILAAYTRNKSPTSLDSDPRRVDFNIISGTSMACPHVSGLAALIKSVHPDWSPAAIRSALMTTAYTNYKNGMTLLDSANNKPATPFDFGAGHVDPVLALNPGLVYDLTVDDYLYFLCALNYTADDIETMARRKYTCDPKKNYSLTNLNYPSFGVVFEIGNGVKEIKHMRTLTNVGAAGTYKVSIKSDAPSVKISVEPKVISFKKNEKKSYIITFTTSSSKSAQSFGSLEWSNGKTIVRSPIAFSWNLRRKVQE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00448 517 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 65 IPR037045 -
Car08g00448 517 PRINTS Subtilisin serine protease family (S8) signature 89 108 IPR015500 -
Car08g00448 517 PRINTS Subtilisin serine protease family (S8) signature 292 308 IPR015500 -
Car08g00448 517 ProSitePatterns Serine proteases, subtilase family, serine active site. 293 303 IPR023828 -
Car08g00448 517 Pfam Subtilase family 223 355 IPR000209 GO:0006508|GO:0008236
Car08g00448 517 Pfam Peptidase inhibitor I9 5 65 IPR010259 -
Car08g00448 517 Pfam Fibronectin type-III domain 410 506 IPR041469 -
Car08g00448 517 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 127 510 IPR045051 -
Car08g00448 517 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 128 IPR045051 -
Car08g00448 517 Gene3D - 380 509 - -
Car08g00448 517 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 127 510 - -
Car08g00448 517 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 3 128 - -
Car08g00448 517 Pfam PA domain 140 210 IPR003137 -
Car08g00448 517 Gene3D - 135 232 - -
Car08g00448 517 SUPERFAMILY Subtilisin-like 6 420 IPR036852 GO:0004252|GO:0006508
Car08g00448 517 Gene3D Peptidase S8/S53 domain 233 376 IPR036852 GO:0004252|GO:0006508
Car08g00448 517 Gene3D Peptidase S8/S53 domain 91 130 IPR036852 GO:0004252|GO:0006508
Car08g00448 517 ProSiteProfiles Serine proteases, subtilase domain profile. 1 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00448 Car-Chr8 3771017 3773188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00448 127 509 Subtilisin-like Serine Gene Family AT5G67360 62.532 2.10e-164 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00448 - - gmx:100815413 508.449