Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00447 ATGATTTATCTCGCTGGTTACACCACCACTGCCGTCGGAATCAATAATCGGGTACCAATTTCTTTGACATCAATTATACCAAACAGCACGGTTTTGTCACGCTACGTCGTCGTATTTAAGTTCAGTAGCTCCTCTGAACCAGTTTGGACAGATTATCCCATAGAGAACGCTTACGAGCTTTTAGGAATATCAGAAACAAGCTCATTGGTTGAGATCAAAGCGTCGTTTCGCAAATTGGCGAAAGAAACTCACCCTGACCTCGCTGATTCAAGGAACGATTCCACTGCGTCTCGACGATTCGTTCAAATCCTTGCTGCTTATGAGATTCTTTCAGATTCTCGGAAGAGAGCCCATTATGACATGTACTTATATTCTCAGAAAAAGCTTATGCAGAAGCGTTCTGAACAGGGTTCAAAATTGCGCATTTACGAATCACAGGCTACGGCATTCAAGGAGATGGAAGTTGTTGAATGGTTAAGGTGGTACAGATTAGCTATAAGTGATATTTTGTCAGAGAAGAAGGTGGTGGTTGGAACAGGATATTTTGATATTCTTGAGAGAGATTTTTATTCTGCCATTCATGCAGCATACTATGGTCCCGAAATTGATTCTATCCCCATGGAGCTTCTTCCTGACTGTTTTGAGGCTGAGGAGAGGTCCTCTTATGAAACTCCTGAGGTTTTACACTTGGTTTCAGGCCGTGATCTTTTTGGGATGGTTTGCCTAGTCAACAAGACTCCAGAGATATCATCTACTGAAAGTGAAAAGTTAACTTCTTATAGATCCTTCCATTCAGGCCTTTGTCAATCTATAACGGATGTTAACATTCACAGGCATGTACAAATGCCAGATGATTTTGGAACTCAACAAGGTCACAGCTCTAAAATTTCAAGCAATGTATCAGATGCGTATAGAGATCTAGAATTGCATGTTTCCGGAAAATTAGTTGCTACGGCATCTAGGGTCCTACCCAGATGTTGTTCTGGTGTGATGCAAAAAGAAGATGATGAAGATCACATTCACGTGTTCCTTAATTCAGATGAAGATCCTAGACATATCAGTAGTAGCTTTTCAAGAAATTTATTTGCAAATAGCACAGTTGGAAGCAAAATGCATTTGGGAACCATATCTGGACTTGGGAGCAGTCCAGACGAAGGATGTTGTTATGTCTACAACAGTAGTCGTGAAAAGACCCATGTGATTATGAAACATCGAACATTGTTGGTGAAGCATATGCACTGGTATCATGTGGGTGAGAAAGTTTCAGTTTGCGAGTGTAGATGCACGAGAGCATGTTTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGCTTTCATGACATAGGGGGTTGGTATGTTGAAACATATGGCAAAGATAAGAAGGGTCGTACTATACTATCGCAAAGGTTCTGGGATGGATTGGATTATAGCGAGCAAGCTGAAAAAAGACTTCATCCAGCAATGTATCTGTTTGCTCTTGCATATCGAACACTTGATCTTGAATATGCCAAAACAAGCAAGAAAACATTTAGGAAAGCCGTTGGAGCACATATGTTCCGAATTCTTCACTGGTGCAGGAAACTTGCTAAATAG 1599 0.4103 MIYLAGYTTTAVGINNRVPISLTSIIPNSTVLSRYVVVFKFSSSSEPVWTDYPIENAYELLGISETSSLVEIKASFRKLAKETHPDLADSRNDSTASRRFVQILAAYEILSDSRKRAHYDMYLYSQKKLMQKRSEQGSKLRIYESQATAFKEMEVVEWLRWYRLAISDILSEKKVVVGTGYFDILERDFYSAIHAAYYGPEIDSIPMELLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCLVNKTPEISSTESEKLTSYRSFHSGLCQSITDVNIHRHVQMPDDFGTQQGHSSKISSNVSDAYRDLELHVSGKLVATASRVLPRCCSGVMQKEDDEDHIHVFLNSDEDPRHISSSFSRNLFANSTVGSKMHLGTISGLGSSPDEGCCYVYNSSREKTHVIMKHRTLLVKHMHWYHVGEKVSVCECRCTRACLPPSKFWLFEPRCGFHDIGGWYVETYGKDKKGRTILSQRFWDGLDYSEQAEKRLHPAMYLFALAYRTLDLEYAKTSKKTFRKAVGAHMFRILHWCRKLAK 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00447 532 SUPERFAMILY Chaperone J-domain 48 124 IPR036869 -
Car08g00447 532 ProSitePatterns Nt-dnaJ domain signature. 100 119 IPR018253 -
Car08g00447 532 PRINTS DnaJ domain signature 58 76 IPR001623 -
Car08g00447 532 PRINTS DnaJ domain signature 76 91 IPR001623 -
Car08g00447 532 PRINTS DnaJ domain signature 95 115 IPR001623 -
Car08g00447 532 Gene3D DnaJ domain 51 143 IPR036869 -
Car08g00447 532 Pfam DnaJ domain 56 120 IPR001623 -
Car08g00447 532 SMART dnaj_3 55 115 IPR001623 -
Car08g00447 532 CDD DnaJ 56 112 IPR001623 -
Car08g00447 532 ProSiteProfiles dnaJ domain profile. 56 123 IPR001623 -
Car08g00447 532 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 41 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00447 Car-Chr8 3757681 3764661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00447 58 122 C2H2 Transcription Factor Family AT1G74250 44.118 3.88e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00447 08 3757681 3764661 Car08g00447 08 3757681 3764661 ECH