Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00438 ATGGTTGATGAATCACTAACAGTAATTGTGAGAGAGTTTGATGTTAATAAAGACAGAGAAAGAGTAGAAGCAGTTGAAATGTCATGTGAGGTTGGACCCAATCATAAACTTTCTCTCTTCACCAACATGTTTGGTGACCCGATTTGCAGGGTCCGCCACTCCCCTTCTTTCCTCATGCTGGTAGCTGAAATTGGCGAAGAGATAGTGGGAATGATAAGAGGATGCATCAAAACCGTTACATGCGGTAAAAAGCTCTCAAGAAAATCAAAACAATACAACATCACCACTCACACTAATCAAATTCCAATATACACCAAACTCGCTTACATATTAGGCCTTCGCGTTTCTCCTAATCAAAGGAGAATGGGAATAGGGTTGAAGCTTGTGAACGAAATCGAAGCTTGGTTTAGAAAAAATGGTGCTGAATATTCTTACATGGCAACGGAAAACGATAATTTAGCGTCCGTTAAACTTTTCACCGACAAATGTGGTTATTCAAAGTTCCGTACACCGTCAATTCTTGTCAACCCAGTTTACGCTCATAAAATAAAGGTTTCACCTAACGTCACTGTCATTCCGTTAACTCCTTCGGAGGCCGTTATTCTTTACCGTAACCGTTTCTCCACCACGGAGTTTTTCCCTCGGGACATTGACTCCGTTCTTAAAAACAAACTCAGTATCGGGACTTTCCTTGCCGTACCAAGTGGATCCTACAGTACCGAATCGTGGCCTGGCCTATATAAGTTTCTTTTGGGCCCACCATATTCCTGGGCCGTCTTAAGCGTTTGGAATTCTAAAGAGGTTTTCACGCTCCAGGTTCGTGGCGCGTCGCGCGTGAAGCGCGCTCTTGCAAAAACAAGCCGTGTTTTGGACCGGGCCTTGCCGTGGTTGAACTTACCGTCGATTCCGGATTTGTTTAGTCCGTTTGGGTTTCATTTTTTGTATGGGCTTGGTGGTGAAGGACCAAAATCGGTTAAGATGATTAAGGCCCTTTGTGGGTTTGCGCATAATATGGCTTTGGAACGTGGGTGTGCAGTGGTGGCTACTGAAGTTGCTTCGTGCGAACCACTTAGGTTTGGAATACCACACTGGAAAATGCTATCTTGCGCCGAGGATTTATGGTGTATTAAGAGGCTTGTTGAGGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAGTCTGTTTCTGAATTCTCCATTTTTGTGGATCCCAGAGAAATTTAA 1224 0.4371 MVDESLTVIVREFDVNKDRERVEAVEMSCEVGPNHKLSLFTNMFGDPICRVRHSPSFLMLVAEIGEEIVGMIRGCIKTVTCGKKLSRKSKQYNITTHTNQIPIYTKLAYILGLRVSPNQRRMGIGLKLVNEIEAWFRKNGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSILVNPVYAHKIKVSPNVTVIPLTPSEAVILYRNRFSTTEFFPRDIDSVLKNKLSIGTFLAVPSGSYSTESWPGLYKFLLGPPYSWAVLSVWNSKEVFTLQVRGASRVKRALAKTSRVLDRALPWLNLPSIPDLFSPFGFHFLYGLGGEGPKSVKMIKALCGFAHNMALERGCAVVATEVASCEPLRFGIPHWKMLSCAEDLWCIKRLVEDYSDGSVGDWTKSVSEFSIFVDPREI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00438 407 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 50 167 IPR016181 -
Car08g00438 407 Gene3D - 15 171 - -
Car08g00438 407 CDD NAT_SF 59 143 - -
Car08g00438 407 Pfam Acetyltransferase (GNAT) family 32 165 IPR000182 GO:0016407
Car08g00438 407 PANTHER N-ACETYLTRANSFERASE 2 406 - -
Car08g00438 407 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 184 IPR000182 GO:0016407
Car08g00438 407 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 2 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00438 Car-Chr8 3639321 3640804 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Car08g00438 Acetyltransf_1 2.7e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00438 - - gmx:100800613 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00438 08 3639321 3640804 Car08g00438 08 3639321 3640804 ECH
Car08g00438 08 3639321 3640804 Car07g01379 07 12874247 12875911 PCT