Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00435 ATGAAAGCTCATTACTTGAGCTTCAATATTGTCATAATCACAATCATCTTCTCACTATCTCTATCAAAAAATGAATCTGATCATAACACAAGAAGAATTCTCCATCAACCATTATTCCCAGCAAGTTCAGCTccaccaccaacacccaccctgtcaccaccaccaccaccaccCTCTACCTCCGACGGCAACATTCCTTTCTTCCACGAATACCCAGAAGCACCACCATCAGATCAAAACCAAGCAGCACCGATAACATCATCAAACGCCACAACAGCAAATCCAACGGCAACACAACCAGCAAAAGGAACAAAAAAAGTAGCAATTGCAATTTCCGTTGGAATTGTAACGTTAGGAATGTTGTCGGCACTAGCTTTCTTTTTATACAAACACAGAGCAAAGCAACCTGCGGAAACACAGAAGCTAGTGTGTACTAACCCACACAGGaacaacaacaacaacaacaaccaacaactacaagattcaaattcaactGCTCCAGTAGTACCTTCTAATTTTCTCTACATTGGAACTGTGGAACCTTCCAGAAGGTCAACCACGGTCAACGAAACGGAAAAGCCGAACCGATCGCCTTACCGGAAACTTAATTCGGTTAAGCGATCTGATCGGTATCGACCTAGCCCAGAATTGCAGCCAATGCCGCCTTTAAGTAAGCCTCTTGATGGAAACAACCCGCCGGCGATTTCGCCGTCGTCGTCTTCCGACGAGGAAAGTAACGAGACGACGTTTCATTCGCCGGTGAACTCGTCGTTAAGTCAGGAAGACGGATTTTACACGCCGGTTTCACGTCAGAGTTCTCTCGCTAACGGTAGTCCGGCGAAGAGAGAGAATCATTCGACGACGGCGACACCGCTTCCGATTTCGAAAAGAAGTTCGCCGAAATCTCGTATTTCTTCTTCGTCGCCGGATGTTAGACACGTCATCATACCTTCGATCAAACAGACTCCACCCCCGCCGCCACGTCAGCGACCGGATAATAAACTATTAACTTCCGGTGGACATTCAAGAAAGCCAAAATTCTCAGCGCCGCCACCACCTCCGAATTTAGCGCATCTTCAATCAACAACGAATGCATTTTCACACGTGTCTAAAACTTCCCTTAATCGtccacctccaccgccgccaccgccacctcctccgccGATTAGAAAAACAGGGTCACCGGCGGTTGAAGGTGTTTCAGCTTCTAAATCTATAAAGACGCAACCTTGGTCTATAAGTGAAGAAGGTGGTGATTCTGGTAATAGTGTAACAAAAGGTTCAGAATCAGTTTCAGTTTCCGATCGTGTTGATAAAAGTGCGAGTTTGTTGAGATCTTCCGAGAGGCTTGAAATTGAAGCCAATGAAACGGAAGGTGGAAAACCAAAGTTGAAAGCTTTGCATTGGGATAAAGTTAGAGCTACTTCAGACCGTGCTACAGTGTGGGACCAAATAAAATCAAGCTCATTTCAATTAAATGAGGATATGATGGAGTCTTTGTTTGGCTGCAATGCAATGAATTCTGCTACAAAACCAAAAGAACTTCCTAGAAAATCAGTTCTCCCTTCAGCTGATCATGAGAACAAGGTTTTAGACCCTAAGAAGTCTCAAAATATTGCTATACTGTTAAGGGCACTGAATGTGACAAGAGATGAGGTGTCTGATGCTCTTTTGGATGGAAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACCCTGGTAAAGATGGCTCCTACAAAAGAGGAAGAGATAAAATTAAAAAACTATGGCGGTGATCTCTCGAAACTTGGATCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCTTTCAAAAGAGTTGAAGCTATGCTATACAGAGCCAACTTTGATTCAGAAATCAACTACCTCAAGAAGTCTTTCCAAACACTGGAGGCGGCAAGTGAGGAATTAAGGAACAGTAGGTTATTCTTCAAACTCCTTGAAGCCGTTCTCAGGACAGGTAACAGAATGAATGTCGGCACTAATCGAGGTGATGCTAAAGCTTTCAAACTCGATACACTCCTAAAACTTGCAGACATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAGAATCTGCAAATGGAAGTATACTTCCCAACCAAATCGACTCCAAATTTAACGAGGAAGATTTTAAGAAGAAAGGATTGCAGGTTGTGGCTGGTCTCAGTAGAGACCTTGTTAATCTCGAAACAGGGCTCGATAAAGTGCAATCAGTTTTGCAATATGAGAAGCCAGATATGAGAGACAATTTCTTTAACTCCACAAAGCTCTTTCTGAAATACGCTGAAGACGAAATTGTGAGGATCAAATCTCATGAAAGAGAGGCTTTGTTTCTTGTAAAAGAAGTTACCGAATACTTTCATGGAAATGCAGCAAAGGAAGAAGCCCATCCTCTAAGAATTTTCATGATTGTGAGAGATTTCTTAAACATATTGGATTTGGTTTGCAAAGAAGTGGGAAGGATGCATGATAGAATTGTTGGTGGTGCTTCAAGATCCTTCAGAATAGCTTCAAATGCACCATTACCTGTTCTTAACAGGTACAATGGAAGACAAGATAGAAGTTCAGATGAAGAAAGCTCTTCCCCTTAG 2658 0.4048 MKAHYLSFNIVIITIIFSLSLSKNESDHNTRRILHQPLFPASSAPPPTPTLSPPPPPPSTSDGNIPFFHEYPEAPPSDQNQAAPITSSNATTANPTATQPAKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKQPAETQKLVCTNPHRNNNNNNNQQLQDSNSTAPVVPSNFLYIGTVEPSRRSTTVNETEKPNRSPYRKLNSVKRSDRYRPSPELQPMPPLSKPLDGNNPPAISPSSSSDEESNETTFHSPVNSSLSQEDGFYTPVSRQSSLANGSPAKRENHSTTATPLPISKRSSPKSRISSSSPDVRHVIIPSIKQTPPPPPRQRPDNKLLTSGGHSRKPKFSAPPPPPNLAHLQSTTNAFSHVSKTSLNRPPPPPPPPPPPPIRKTGSPAVEGVSASKSIKTQPWSISEEGGDSGNSVTKGSESVSVSDRVDKSASLLRSSERLEIEANETEGGKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCNAMNSATKPKELPRKSVLPSADHENKVLDPKKSQNIAILLRALNVTRDEVSDALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYGGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEINYLKKSFQTLEAASEELRNSRLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGAESANGSILPNQIDSKFNEEDFKKKGLQVVAGLSRDLVNLETGLDKVQSVLQYEKPDMRDNFFNSTKLFLKYAEDEIVRIKSHEREALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGASRSFRIASNAPLPVLNRYNGRQDRSSDEESSSP 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00435 885 Gene3D Formin, FH2 domain 451 845 IPR042201 -
Car08g00435 885 MobiDBLite consensus disorder prediction 231 312 - -
Car08g00435 885 ProSiteProfiles Formin homology-2 (FH2) domain profile. 454 860 IPR015425 -
Car08g00435 885 SMART it6_source 454 849 IPR015425 -
Car08g00435 885 Pfam Formin Homology 2 Domain 457 834 IPR015425 -
Car08g00435 885 MobiDBLite consensus disorder prediction 144 441 - -
Car08g00435 885 SUPERFAMILY Formin homology 2 domain (FH2 domain) 378 844 - -
Car08g00435 885 PANTHER FORMIN-LIKE PROTEIN 6 885 - -
Car08g00435 885 MobiDBLite consensus disorder prediction 398 440 - -
Car08g00435 885 MobiDBLite consensus disorder prediction 144 171 - -
Car08g00435 885 MobiDBLite consensus disorder prediction 40 62 - -
Car08g00435 885 MobiDBLite consensus disorder prediction 38 104 - -
Car08g00435 885 PANTHER FORMIN-RELATED 6 885 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car08g00435 885 MobiDBLite consensus disorder prediction 374 392 - -
Car08g00435 885 MobiDBLite consensus disorder prediction 186 213 - -
Car08g00435 885 MobiDBLite consensus disorder prediction 79 101 - -
Car08g00435 885 MobiDBLite consensus disorder prediction 358 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00435 Car-Chr8 3601860 3606811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00435 455 875 FH2 protein (formin) Gene Family AT5G67470 69.231 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00435 - - mtr:MTR_5g015690 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00435 08 3601860 3606811 Car08g00435 08 3601860 3606811 ECH
Car08g00435 08 3601860 3606811 Car07g01378 07 12849960 12854735 PCT