Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00434 ATGACTAACATGGATGGACAATCACTCCATAATGCTAAGAAACTCGTTCCGGTACCGCCTCCTTTGCCTCGTTCAGCAGCAACTGGTTATCCTTGTGAGTATCTGGTGATGAATAATTTAGCTCCCAGAGGGCAAAGCAGCTGTATCTCTTCAGCAACAAGAGATTTGTGGGAGCGCCTTTTCAATGAAGGTTATAAAGCAGATGTTCGCATTAATACGGATAACGGTGGCATTGTTTATGCTCATTCTAGCATTATTGCCGTGGCTTCTCCTGTATTGAGAGGCATGCTGAAGCAAGCAGATCGTCGCAATCGATGGCGTTCAATCTCAATCTTTGGGGTTCCACATGATGCTGTGCGAGTTTTTATTCGATACTTGTACTCTTCCTGTTATGAGAAAGAAGAAATGGAGGAATTTGTCCTACATTTGTTGGTGCTTTCGCATGTATACTCGGTTCCTCACTTGAAGCGTTTATGTGAACAGAAGCTAGAATTGGGTCTACTCAACATAGATAATGTAGTTGATGTATTTCAACTTGCATTACTGTGTGATTCTCCACGGCTCAGTCTCATCTGTCACCGTAAAATAATCAAACACTTCAAAACTGTTTCGGCTTCAGAAGGATGGAAAGCAATGAAGCTGAGCCACCCAATTCTAGAAAAGGAAGTTCTGGAATCAATGATTGAAGAAGAAAATAGTAAGAAGGAGAGGGTCAGAAAAATGAACGAAAGAGAGATCTATCTGCAATTATATGATGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTCGAACTATTGGCCCTCACGACAAAGCCTTCAAAGCAAACCAACCATGTAGGTATGCATCCTGCAAAGGGCTTGAATTGCTCGTTCGTCATTTTGCTGGCTGCAAGTTGAGAGTCCCAGGAGGTTGTGCTCATTGCAAGAGAATGTGGCAACTGTTGGAGTTGCATTCTCGACTATGCGCTGATCCGGATATTTGTAGAGTTCCTTTGTGCAGGAACTTTAAGCAGAGAATATCAAAACAAAGCAAGAAAGATGAAATTAGATGGAAAATATTGGTTGAAAAGATTTTGAGAACAAGAGGAATCGGGATTGCGTCATGCTTTCGGCGACTATGA 1128 0.4202 MTNMDGQSLHNAKKLVPVPPPLPRSAATGYPCEYLVMNNLAPRGQSSCISSATRDLWERLFNEGYKADVRINTDNGGIVYAHSSIIAVASPVLRGMLKQADRRNRWRSISIFGVPHDAVRVFIRYLYSSCYEKEEMEEFVLHLLVLSHVYSVPHLKRLCEQKLELGLLNIDNVVDVFQLALLCDSPRLSLICHRKIIKHFKTVSASEGWKAMKLSHPILEKEVLESMIEEENSKKERVRKMNEREIYLQLYDAMEALVHICRDGCRTIGPHDKAFKANQPCRYASCKGLELLVRHFAGCKLRVPGGCAHCKRMWQLLELHSRLCADPDICRVPLCRNFKQRISKQSKKDEIRWKILVEKILRTRGIGIASCFRRL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00434 375 ProSiteProfiles Zinc finger TAZ-type profile. 241 338 IPR000197 -
Car08g00434 375 MobiDBLite consensus disorder prediction 1 20 - -
Car08g00434 375 ProSiteProfiles BTB domain profile. 67 135 IPR000210 GO:0005515
Car08g00434 375 Gene3D Potassium Channel Kv1.1; Chain A 44 166 IPR011333 -
Car08g00434 375 Pfam BTB/POZ domain 59 163 IPR000210 GO:0005515
Car08g00434 375 Coils Coil 221 244 - -
Car08g00434 375 Gene3D - 168 240 - -
Car08g00434 375 SMART TAZ_2 244 336 IPR000197 -
Car08g00434 375 SUPERFAMILY POZ domain 47 163 IPR011333 -
Car08g00434 375 SMART BTB_4 67 167 IPR000210 GO:0005515
Car08g00434 375 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 8 373 IPR044513 -
Car08g00434 375 SUPERFAMILY TAZ domain 244 344 IPR035898 -
Car08g00434 375 Pfam TAZ zinc finger 252 335 IPR000197 -
Car08g00434 375 CDD BACK 169 226 - -
Car08g00434 375 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 8 373 - -
Car08g00434 375 Gene3D TAZ domain 241 363 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00434 Car-Chr8 3598033 3600074 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Car08g00434 BTB 1.8e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00434 - - lja:Lj2g3v1968190.1 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00434 08 3598033 3600074 Car08g00434 08 3598033 3600074 ECH