Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00432 ATGGGGAGCTCTATTGGCACCTCTTTTTCTTTGTCTAGTCTTATGTGTTATGAACAAACAGAATCAACTCTCTTTGAAGAAGATGAAGATGATAACACTCTCTTCATTAACTCACTTGATCATAATTATGATAACCCTTTTTTCCTTTTGGAAGATGAAGATGAATACATTGAGTATTTGTTCAAACAAGAAACAGGATTTGGTTCCATCACTCATTTTTTGTCCTatgatgatgatcatgatgatgatTCAAGGAAAAACATATTTTGGCTCAGAACTGCTCGTTTGCATGCTATTGATTGGATTTTCAATACACAAGCAAAGTTTGGGTTCAGTGTTCAAACAGCTTATTTATCAATCACTTATTTTGATCGGTTTCTTTCAAAACGATCCATTGATGAATCAAAACCTTGGGCTATTCAATTATTATCAGTGGCATGTTTATCAATTGCAGCAAAAATGGAAGAACAAAGGGTTCCTCCACTATCAGAATATCCAATAGAATATAGATTTGAGAACAAAGTTATTAAGAACATGGAACTTTTGATTTTGAGTACATTGGAATGGAAAATGGGATTACCAACCCCTTTTGCTTATTTGCATTATTTCTTCACTAAGTTCTGTTCTGGATCCAAATCACAAACAATTATCTCAAAAGCCACACAACACATTTTGGAATTGGTCAAAGATTTTAATTTGATGAATCAACGACCATCTATAATTGCTTCTGCTGCTATATTAGCATCTTTTGATTCCACATTAACAAAAAAGGCAATGGATCTTCGGATAAGTTTAGTCTCAACATGGGGAAATCTAGAAAGTGGACAAGTATATTCATGTTACAATATAATACAAGAAAACAGGAGAAACAAAGTTAAGAAGACACCTTCATCGGATTTATTATCAACACAATCGAATTCCATGTGTGTTGTTGAGGACAAATCAAATGCTTGTTCAGGAGTTAAGAGAAAGCTAAGTTATGAGGACATTGAAGAATGTCATGGACAAAAGCTACATCGACCTTAG 1026 0.3304 MGSSIGTSFSLSSLMCYEQTESTLFEEDEDDNTLFINSLDHNYDNPFFLLEDEDEYIEYLFKQETGFGSITHFLSYDDDHDDDSRKNIFWLRTARLHAIDWIFNTQAKFGFSVQTAYLSITYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQRVPPLSEYPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCSGSKSQTIISKATQHILELVKDFNLMNQRPSIIASAAILASFDSTLTKKAMDLRISLVSTWGNLESGQVYSCYNIIQENRRNKVKKTPSSDLLSTQSNSMCVVEDKSNACSGVKRKLSYEDIEECHGQKLHRP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00432 341 Pfam Cyclin, N-terminal domain 83 191 IPR006671 -
Car08g00432 341 Gene3D - 93 192 - -
Car08g00432 341 CDD CYCLIN 95 184 IPR013763 -
Car08g00432 341 Gene3D - 193 280 - -
Car08g00432 341 PANTHER CYCLIN-D5-1 56 324 - -
Car08g00432 341 SUPERFAMILY Cyclin-like 176 289 IPR036915 -
Car08g00432 341 SMART cyclin_7 100 185 IPR013763 -
Car08g00432 341 PANTHER CYCLINS 56 324 IPR039361 -
Car08g00432 341 Pfam Cyclin, C-terminal domain 194 294 IPR004367 -
Car08g00432 341 SUPERFAMILY Cyclin-like 43 191 IPR036915 -
Car08g00432 341 SMART Cyclin_C_2 194 305 IPR004367 -
Car08g00432 341 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00432 Car-Chr8 3575230 3577081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00432 51 244 Core Cell Cycle Gene Families AT4G37630 43.192 4.10e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00432 K18811 - gmx:100798140 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00432 08 3575230 3577081 Car08g00432 08 3575230 3577081 ECH
Car07g01377 07 12846341 12848623 Car08g00432 08 3575230 3577081 ECH