Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00406 ATGCTTTCTACCCTTTCCGCTTCCAATTTCACGGCGTTAGACGTCGATTTAACGCCGTGGGATTTCGATGACGTTTTGTCAGCCTTCGAAATACCAACCAGTCCCAAGCTCACTTCAAGTTCCGGTTCGGGTGAACCAAATGAAATCCGTCTTGAAGTAGAAAAACCGGGTTTTGATGACTCGAACCGGAATATGGAGGAGAGAAAGAGGAAGAGAATGATATCAAACCGGGAATCAGCAAGGAGGTCACGTATGCGTAAACAAAGGCATCTAGAAAATTTACGGAACCAATTGAACCTTTTTAAGGTTAAAAATCGGGAATTAAAAACCGGGTTGCAATTTCTACTTTGTCACCTTAATCGCCTACGAACCGAAAACGAATGGCTCCGGTCTGAACGAACCGTGCTGAGGCAAAAATTGTCGAACATAAGTCAAATTTTGGTTTTTCAACCGTTCTCCACTGCATGGCCATGCAATATTGCCACAGCTGAATAA 495 0.4364 MLSTLSASNFTALDVDLTPWDFDDVLSAFEIPTSPKLTSSSGSGEPNEIRLEVEKPGFDDSNRNMEERKRKRMISNRESARRSRMRKQRHLENLRNQLNLFKVKNRELKTGLQFLLCHLNRLRTENEWLRSERTVLRQKLSNISQILVFQPFSTAWPCNIATAE 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00406 164 MobiDBLite consensus disorder prediction 56 87 - -
Car08g00406 164 CDD bZIP_plant_GBF1 69 120 IPR045314 GO:0003700|GO:0006355
Car08g00406 164 Gene3D - 66 146 - -
Car08g00406 164 SUPERFAMILY Leucine zipper domain 68 116 IPR046347 GO:0003700|GO:0006355
Car08g00406 164 Coils Coil 119 139 - -
Car08g00406 164 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 71 86 IPR004827 GO:0003700|GO:0006355
Car08g00406 164 Pfam bZIP transcription factor 67 126 IPR004827 GO:0003700|GO:0006355
Car08g00406 164 PANTHER BZIP TRANSCRIPTION FACTOR 23 164 - -
Car08g00406 164 Coils Coil 77 111 - -
Car08g00406 164 MobiDBLite consensus disorder prediction 56 81 - -
Car08g00406 164 PANTHER BZIP TRANSCRIPTION FACTOR 44 23 164 - -
Car08g00406 164 SMART brlzneu 64 128 IPR004827 GO:0003700|GO:0006355
Car08g00406 164 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 66 129 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00406 Car-Chr8 3363093 3363947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00406 5 149 bZIP Transcription Factor Family AT3G49760 42.466 4.20e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car08g00406 bZIP_1 4.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00406 - - gmx:102661188 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00406 08 3363093 3363947 Car07g01362 07 12702592 12703507 PCT