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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Car08g00405
ATGAACTTTAACAATCTAATGAATATAGGTGTTCTTTCACACACTACTCATCAGACACAACCTTcttctgcttctgcttctgcttctgctACTGAAGCATTTGTACCAAGCTTTTATCATCACCCTACACCTCTTCATAACTATGGATATTACTATGGACTTGAAGGTGAGCATGTTGGATTGTATTCAGCCTTGCCCATCATGCCTGATGGATCCATTTATGGAATAGAAGCTCTATGTAAATCACAAGCACAAGAAGCAATGCAAGTAAGCATAGATGGTACTTTTCACAAACCAAACAATTCAAATAACATTAATCATGTGCAAGAGAATATCAGCCAACAACAACTATATTACTCTTCCTTAAGAAACCATGATGTGATGTTAGAAGGGTGCATGAAAAATCAGGTAAAAGATAGTGTTCAGCTCCCAAAAATAGTTGAGGATGAAATTTTTGGTATGAGGAGTTGGGATTCAAAGACATGTGGGTTGTCAATGAGTCCTGGTTCACAATCAAGTTGTGTTACAAGTTCACAACAGACATCACTTGCTCCCATTGATTCTGTTTCCATTGAAATGGTAGACATGAAAAAGAATCAGAACCAAACCGTTTTAAGGAATACATTTGGGCAAAGAACATCTCAATATAGAGGTGTAACAAGACATAGGTGGACTGGTAGATATGAAGCTCATTTATGGGATAACAGCATTAAGAAAGAGGGACAAGCTAGGAAAGGAAAGCAAGGTGGTTATGATATGGAAGAAAAAGCTGCTAGAGCTTATGATATGGCTGCACTCAAGTATTGGGGTCCCTCCACTCGTATAAATTTCCCTTTGGAAAATTATGAAAAAGAACTTGAAGAAATGAAGAAAATGACAAGACAAGAATATGTTGCTCATTTAAGAAGGAAAAGCAGTGGATTCTCAAGAGGGGCTTCCATGTATAGAGGAGTAACAAGCAGACACCATCAACATGGAAGATGGCAAGCTCGAATAGGAAGAGTAGCAGGAAATAAAGATCTCTACCTTGGAACCTTCACTACCCAAGAGGAAGCAGCTGAAGCCTATGACATTGCTGCTATAAAATTCAGAGGAGCAAATGCTGTTACAAATTTTGATATAAAAATATATGATGTGGACAAAATTATATCAAGCAGTAATCTTCTTAGCAGTGAACAAGCTAAGCGAAACAGAAATATGGATGATGCAATTAACAATAAACTTTCTACATTTGAAGACATTGAAGTAACAATTCCAATTCAGAAGAGATGCAAAATACAACAACATGACCAAAATCCACCTACACAAAGCTTTGAAAGTTGCACGGTCCAATCATTTTCATTAGCTTTAGATAACATATATCACTATCAAGAAATAGATGAATCAAATCCTTCTTCATTGGTTACAAGCTTGAGTAGCTCAAGAGAAGAAAGTCCAGACAGAACAAGCTTACCAATGCTCTTTGGAATGTCATCAACAGAATCAATGCCTTCATTTTCTTTGCCTCAGATTCCATTGTCTGTCTTTGCTGCTTGGAATGATGCATGA
1548
0.363
MNFNNLMNIGVLSHTTHQTQPSSASASASATEAFVPSFYHHPTPLHNYGYYYGLEGEHVGLYSALPIMPDGSIYGIEALCKSQAQEAMQVSIDGTFHKPNNSNNINHVQENISQQQLYYSSLRNHDVMLEGCMKNQVKDSVQLPKIVEDEIFGMRSWDSKTCGLSMSPGSQSSCVTSSQQTSLAPIDSVSIEMVDMKKNQNQTVLRNTFGQRTSQYRGVTRHRWTGRYEAHLWDNSIKKEGQARKGKQGGYDMEEKAARAYDMAALKYWGPSTRINFPLENYEKELEEMKKMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFTTQEEAAEAYDIAAIKFRGANAVTNFDIKIYDVDKIISSSNLLSSEQAKRNRNMDDAINNKLSTFEDIEVTIPIQKRCKIQQHDQNPPTQSFESCTVQSFSLALDNIYHYQEIDESNPSSLVTSLSSSREESPDRTSLPMLFGMSSTESMPSFSLPQIPLSVFAAWNDA
515
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Car08g00405
515
Gene3D
AP2/ERF domain
214
280
IPR036955
GO:0003700|GO:0006355
Car08g00405
515
Gene3D
AP2/ERF domain
314
376
IPR036955
GO:0003700|GO:0006355
Car08g00405
515
SUPERFAMILY
DNA-binding domain
313
374
IPR016177
GO:0003677
Car08g00405
515
PANTHER
AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR
150
483
-
-
Car08g00405
515
PANTHER
AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR
28
88
-
-
Car08g00405
515
SUPERFAMILY
DNA-binding domain
214
280
IPR016177
GO:0003677
Car08g00405
515
Coils
Coil
279
299
-
-
Car08g00405
515
CDD
AP2
313
374
IPR001471
GO:0003700|GO:0006355
Car08g00405
515
ProSiteProfiles
AP2/ERF domain profile.
215
278
IPR001471
GO:0003700|GO:0006355
Car08g00405
515
Pfam
AP2 domain
215
270
IPR001471
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Car08g00405
Car-Chr8
3351266
3354536
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Car08g00405
47
419
AP2-EREBP Transcription Factor Family
AT4G37750
50.889
6.08e-127
380
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-AP2
Car08g00405
AP2
1.8e-09
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Car08g00405
K09285
-
gmx:100812275
554.673
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Car08g00405
08
3351266
3354536
Car07g01358
07
12663018
12666755
PCT
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