Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00380 ATGGATTCTCGTGAACCAATACCACCACATTCTCATCCTCAATCCCAACCTCTTAACATTATGTTGGTGGGGCCCAATCCTTTCGCTAACAATGTCCCGACTACATTGATGGCACCTGCTACTGCTCGATTCCCTCCGTTTAATGTCCCTTCAACTCATTCTGAGCCTTTCAATGATAACCGTTCCTTGAAGCCATGTGATACTGTGGCAGTCACTCCTTCTGAGTCGTTAAAGAAAAAGAGAGGTAGGCCAAGAAAGTATTTTCCTGAGGGTAATGTTTCTTTGGGCTTGGGTTCTGGTTCTGCCTCGGGATCAGGATCAGGCCCGGCCCGAGTTTCTGGCTCTGGTGTTACTCCTCATGCTATCGTTGTCAATCCTGGCGAGGACATTGTTGCAAAACTTACTGCCTTTCTTAAGGGAGGGCCTTATAATGACATGTGCATTCTTGCTGCCCATGGTACAGTCGGTAGTGTCAGCCTTTATCAGTCAGGGGGTATTGTGAATTATGAGGGCCAATTTGAACTTATATCCCTCTCATGTAACCTGGAAATATCTGAAAATAGCAGTGGTGATAAGAAAATAAGTAGCTTGAAGGTGTCTCTAGCGGGTTTTGATGGACGCCTTTTGGGAGGTGTAGTTGCTGGAAAGCTTACCGCGGCATCCTCTACCCAGATCACATTGGGTGGTTTTACTCTGGGTGGCAAAAAGCTTAGCTCAAATGACCTGAAATCTGGGCCTTCTTCAACGTCTCCTTTTGTTGCTTCCGGGACTCCAACCAGTCCTACCTCTGAAGAGCATTCGAGCGGCGATTCCTCTGGTGATGGCGAGAATAGTCCTTTTAGTCAGGGGCCTGGAATCTACAACAATGCTGATCAGTCTGGTCACAATGTGTCAATCTACCAACAACTGTGGGCGCGCCAAACTCAGCAGTGA 933 0.4748 MDSREPIPPHSHPQSQPLNIMLVGPNPFANNVPTTLMAPATARFPPFNVPSTHSEPFNDNRSLKPCDTVAVTPSESLKKKRGRPRKYFPEGNVSLGLGSGSASGSGSGPARVSGSGVTPHAIVVNPGEDIVAKLTAFLKGGPYNDMCILAAHGTVGSVSLYQSGGIVNYEGQFELISLSCNLEISENSSGDKKISSLKVSLAGFDGRLLGGVVAGKLTAASSTQITLGGFTLGGKKLSSNDLKSGPSSTSPFVASGTPTSPTSEEHSSGDSSGDGENSPFSQGPGIYNNADQSGHNVSIYQQLWARQTQQ 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00380 310 MobiDBLite consensus disorder prediction 51 112 - -
Car08g00380 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 36 282 IPR039605 GO:0003680
Car08g00380 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 116 230 - -
Car08g00380 310 MobiDBLite consensus disorder prediction 51 69 - -
Car08g00380 310 CDD DUF296 118 230 IPR005175 -
Car08g00380 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 36 282 - -
Car08g00380 310 MobiDBLite consensus disorder prediction 96 112 - -
Car08g00380 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 230 IPR005175 -
Car08g00380 310 MobiDBLite consensus disorder prediction 238 292 - -
Car08g00380 310 Gene3D - 119 241 - -
Car08g00380 310 ProSiteProfiles PPC domain profile profile. 114 252 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00380 Car-Chr8 3084027 3087074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00380 72 289 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 38.824 9.04e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00380 - - cam:101504328 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00380 08 3084027 3087074 Car07g01341 07 12373129 12377673 PCT