Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00350 ATGAAGTGTTTTTTCTTCAATAAAAAATCAAAATCAGACCTAAATTTAAACATTAGAAAGAAGAAAAATCAAGGGCCTAATATCGCGCATTCATCGCCAAGGAGTATAAAAGAATTGTGCAAAGAGAGGGAACACAATTTCAGAGATTTTACTTTGCAAGAGCTCGTGGATGCAACAAATGGTTTCAATAAGGTGTTGAAGATAGGAGAGGGGGGTTTTGGGAAAGTATATAGAGGAACAATTACTCATGAAAATGGAATAGGTAACCCAATTACggacacggttgccataaaaaaactcaacacacttggctttcagGGGCATAAGGAATGGCTAGCAGAAGTTCAATTTCTCAGCATTGTGAATCACCCGAATTTGGTTAAGCTTTTGGGGTACTGTTCTGTAGACGATGAAAGAGGAATCAAGCGGTTGTTAGTGTATGAGTTCATGTCTAATAGAAGTCTAGATGATCACCTTTTCAGTCGTTCTTTACCTCCTTTGCCTTGGAAAATCAGATTGCAAATCATGCTTGGGGCTGCTCAAGGGTTACAATATCTACATGAAGGAATGGAGATTCAGGTAaccaacacttatgattaa 600 0.3417 MKCFFFNKKSKSDLNLNIRKKKNQGPNIAHSSPRSIKELCKEREHNFRDFTLQELVDATNGFNKVLKIGEGGFGKVYRGTITHENGIGNPITDTVAIKKLNTLGFQGHKEWLAEVQFLSIVNHPNLVKLLGYCSVDDERGIKRLLVYEFMSNRSLDDHLFSRSLPPLPWKIRLQIMLGAAQGLQYLHEGMEIQVTNTYD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00350 199 PANTHER OS01G0588500 PROTEIN-RELATED 10 195 - -
Car08g00350 199 ProSitePatterns Protein kinases ATP-binding region signature. 68 99 IPR017441 GO:0005524
Car08g00350 199 SUPERFAMILY Protein kinase-like (PK-like) 45 189 IPR011009 -
Car08g00350 199 Gene3D Transferase(Phosphotransferase) domain 1 150 195 - -
Car08g00350 199 PANTHER RECEPTOR-LIKE KINASE PLANT 10 195 - -
Car08g00350 199 ProSiteProfiles Protein kinase domain profile. 62 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00350 199 SMART tyrkin_6 62 198 IPR020635 GO:0004713|GO:0006468
Car08g00350 199 Gene3D Phosphorylase Kinase; domain 1 41 149 - -
Car08g00350 199 Pfam Protein tyrosine and serine/threonine kinase 67 188 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00350 Car-Chr8 2736481 2739746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00350 3 188 Glycoside Hydrolase AT3G07070 37.624 2.76e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car08g00350 PK_Tyr_Ser-Thr 9.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00350 - K00924 gmx:100782248 280.411