Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00349 ATGACTAAGAGAACGAAGAAGGCAGGGATTGTTGGAAAATATGGTACCAGATATGGTGCTAGTCTACGGAAGCAGATTAAGAAGATGGAAGTTAGTCAACATAGCAAATTTTTCTGCGAGTTTTGTGGAAAGTATGCCGTGAAAAGGAAGGCTGTAGGAATATGGGGATGCAAGGATTGTGGGAAATACTGCAAGTGCTGTGACTGTGCGGAGCACCATCCGGAGGTTGAGAGAACAAACCGAGAGTTGAGCTTTTTAAAGAAAAGTGAGTTGTGGTTTTGA 282 0.4291 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKYCKCCDCAEHHPEVERTNRELSFLKKSELWF 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00349 93 Gene3D - 1 90 IPR011331 GO:0003735|GO:0005840|GO:0006412
Car08g00349 93 PANTHER ZGC:171772 1 63 - -
Car08g00349 93 SUPERFAMILY Zn-binding ribosomal proteins 10 63 IPR011332 GO:0006412
Car08g00349 93 Pfam Ribosomal L37ae protein family 4 63 IPR002674 GO:0003735|GO:0005840|GO:0006412
Car08g00349 93 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00349 Car-Chr8 2730589 2733403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00349 1 62 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 91.935 1.30e-37 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00349 K02921 - gmx:100796438 121.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00349 08 2730589 2733403 Car08g00349 08 2730589 2733403 ECH