Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00345 ATGATGGAGGAGGAACGTTATGAGATATTGAGGGAGATTGGTTCAGGGAACTTTGGAGTGGCTAGATTGGCCAAAGACAAGAAGACAGGGGAACAAGTTGCTATCAAATACATTGAAAGAGGAAAAAAGattgatgcgaatgttccaagggagatagttaatcatcgatctttaaagcatccaaatattataaggttcaaagaggtatttttgacccctactcatttagccattgtccttgaatatgcttctggtggtgaactttacgatcggatatgcaacgccggtcgatttagtgaagatgagGCAAGATTTTTCTTCCAGCAACTAATATCTGGAGTCAGCTATTGTCATTCCATGCAAATTTGTCATAGGGATCTGAAATTGGAAAACACTCTATTGGATTTGGATGGACGTTCAGTACCTCGACTGAAAATTTGTGACTTTGGTTTCTCCAAGTCTGCTTTACTGCACTCTAAACCCAAATCAGCAGTTGGAACTCCTGCATACGTTGCTCCAGAGGTTTTCTCTCGAAAGGAATATGATGGAAAGATGGCAGATGTTTGGTCATGTGGTGTCACTCTTTATGTGATGCTAGTTGGATCATACCCATTTGATGATCCTGAAGATCCTAGAAATTTCAGAAAGAGTATTGCAAATACAATGAGTGTTCAATACTCTATACCCGATTATGTACGTTTATCCGCAGACTGTAAACAACTTCTGTCTCGTATTTTTGTTGCTGATCCAGCTAAGAGGATTACAATAATGGAGATAAAACAACACCCTTGGTTTTGGAAGAGTATGCCTAGAGAGATATTTGAGGGTGACAGACAAGGTTACATGGAAACACAAAGAGACCAACCAAGCCAAAGTGTAGAAGAAATCATGCGGATCGTAGGAGAAGCAAGAAAACCAGGACTTACAACCAATGGTGCTGATGTTGATGGAATTATTGAAGAGGAATTTGTTGATGTTAGTATCTGA 987 0.3273 MMEEERYEILREIGSGNFGVARLAKDKKTGEQVAIKYIERGKKIDANVPREIVNHRSLKHPNIIRFKEVFLTPTHLAIVLEYASGGELYDRICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDLDGRSVPRLKICDFGFSKSALLHSKPKSAVGTPAYVAPEVFSRKEYDGKMADVWSCGVTLYVMLVGSYPFDDPEDPRNFRKSIANTMSVQYSIPDYVRLSADCKQLLSRIFVADPAKRITIMEIKQHPWFWKSMPREIFEGDRQGYMETQRDQPSQSVEEIMRIVGEARKPGLTTNGADVDGIIEEEFVDVSI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00345 328 Pfam Protein kinase domain 7 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00345 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Car08g00345 328 SMART serkin_6 7 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00345 328 ProSiteProfiles Protein kinase domain profile. 7 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00345 328 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Car08g00345 328 PANTHER SERINE/THREONINE KINASE 5 322 - -
Car08g00345 328 SUPERFAMILY Protein kinase-like (PK-like) 5 277 IPR011009 -
Car08g00345 328 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 5 322 - -
Car08g00345 328 Gene3D Transferase(Phosphotransferase) domain 1 83 273 - -
Car08g00345 328 ProSitePatterns Protein kinases ATP-binding region signature. 13 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00345 Car-Chr8 2704905 2708825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00345 6 275 CBL-interacting serine-threonine protein kinases AT2G26980 43.416 2.39e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Car08g00345 Pkinase 6.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00345 K14498 - gmx:100817713 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00345 08 2704905 2708825 Car08g00345 08 2704905 2708825 ECH
Car08g00345 08 2704905 2708825 Car07g01293 07 11843831 11847284 PCT