Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00339 ATGAATTTGGAGTCATCAAGAGGAATGGCAATGTCAGCCGGTAATGGGCATTCTGAAGAAGAATTTCGGAAGCCATTGATGGAAAATGAGGATTCCACTGTCCTTGCTCAGCCCAAGTTTAAGCGCCGTAAAGTTTCTGCAATTCGTGATTTTCCAGCAGAATGTGGACCATTTTGTTCTGGGGTTGGTCCAATCTTAATAGTAAATAATGGTGGCTTTGGTTCTGTTAATGGTACAATTGTTGAGGATAAGAGTGGCGAGCATTTCGGGGGTGAAGCTGAAAATGATCCTCAAGATTCTGAGTTCAAAAATAATTCGTTATTGACAGAGACTCCTGACCAAACAAGTGACTGTGGTTTGAAGGAGGGAAATCCTGTGGTCTCATCTCATCAAGTGGATGGGACTACTTTGGCTAACAATGGACCTGCAAAAGTGGCATTGGTGGGCATGGAAACTTTGGATATGGAAATTTCAACTGAAGACTCTAGCTTGGAAAAGGAAAATCCTGTGGTCTCATCTCATCAAGTGGATGGGCCTACTTTTGTTAACCACAGACATGCAAAAGTGGCATCGGTGAGCATGGAAGCTTTGGATGCGGAATTTGCAACTGAAGGCTGTAGTTTGAAGAATGAAAATCCTGTGGTTTCATCTCATCTAGTGGATGGATCTACTTTGGCTAATGATGAACGTGCAAAATTGGCATTGGTGGGCATGGAAACTTTGGGTATGGAATTTGCAACAGAAAACTCTGTAAAACAGGATTTCTCTTATATATCAAAGTCATCATCTCCAGTCGGTGAGGTAGCTATGTCTGACGACTTGAAATCCTCATCGTCCAATATCAACATTGGTGGTTCTGGTGCTTGTGTTGAGGAGGCTATAACTAGAAGGTATCCTCCTCGTAGAAAAATTGCAGCGGTCAGAGACTTTCCTCGTTTATGTGGACGCAATGCTCCCCGTCTCAGTAAGGATGAGTGTCTAAAGGAGATCTCTTTGAATAAAAACAGAGTGGGTCTACAAGACTTGGCTTTAGATGTCGGTCCATTTAAAAAAGTTGCAGCCGCCAACATAAAAGAATTGGAAAATAACATTCCACTTGAACATGGTTACAAGAGAAAGCTTGCTGACATCGTTCAAGCTGATTCTGAAGGGAATGATACAAGAGAAAAGTACATTAAACTTCCTGAAAAACGTAATCATCATCAGGTTAACATAAATTCCAAGGCAGTGGCTAAAGAGGAAATGAAGGACATTGTACTGGCTGAGGGAACATCAGCGTTAGATATTGTTTACCCAGAAGTCCGAAGTCCTGAGGGAAAACTGAACGTCTCATCAGGCAGGAAAGTAGTGCTAGGCTTGATGTCTAAATCAGAATGTCCTTGGAGATCTGATAATGATTGCTCCAAATTTAAATCAATAGAGGGTACAAATGAAAGGAAGCGAAAGAAAGTTGATTTTTATGCCCAAATAGACAGGTCTAAAACTGCTATCAAGACGAAACTGGTACCAAATCATTCGGGGCACAATTCACTGAAAAAGAAAAAAGGAAATTCTACTTCTGATGGCATGGGTCAATTAGTAATACGGGAGAAGGATTCTCTTGGTCCTAATGAAAATAACAAAGACTTTAAAAGTGTCCCAAAACCACTTAGTGTAATTGTTCCTCCTCTTGGTAATAGTGATTTCAGTGGTCATGTGAATGACTCAGTGACCCGAAATAAAGTGAGGCAAACATTACGCCTGTTCCAAGCTGTTTCTAGAAAGCTTTTGCAAGAAGTGGAAGCAAAGTCAAGTGAGCGAGAAAGAAAGAGGATTGATTTACAAGCCGCAAAGATACTTAAGGAAAATGGGAACTATGTTAACACAGGGAAGCAGCTCTTGGGACCTGTCCCTGGGGTCGAAGTCGGTGATGAGTTTCAATACAGAGTGGAGCTTAATATGATTGGCCTTCATCGCCAGACTCAGGGTGGTATAGATTATCTGAAGCACAATGGTAAGATCCTTGCAACTAGTATCGTTGCGTCGGGGGGATATGCTGATGAATTAGATAATTCGGATGTTTTGATTTATACGGGGCAGGGTGGAAATGTGATGACCACTGGTAAAGAGCCAGAAGATCAGAAGCTTGAAAGAGGCAATCTTGCTTTGAAAAACAGTAGCGAGGAAAAGAATCCTGTTAGGGTGATACGGGGTTCTGAATCAATGGATGGAAAATCCAAGACATATGTTTATGATGGACTGTATCTAGTTGAGTCGCATTGGCAGGATATGGGGCCACATGGGAAACTGGTTTATAGGTTTCGCTTGCGAAGAATCCCAGGTCAACCAGAACTTGCCTTGAAGGAAGTGAAGAAATCTAAAAAGTTCAAAACAAGAGAAGGTCTGTGTGTTGAAGATATTTCTTACGGGGTAGAGCGAATTCCCATATGTGCTGTGAACATCATAGATGATGAGAAACCCCCACCATTTAAATACATAACTAGTATGATGTATCCTGATTGTTGCAATCTCGTCCGTCCAGAAGGCTGTAATTGTACCAATGGATGCTCTGACCTGGACAAATGTTCTTGTGTACTTAAAAATGGGGGTGAGATCCCATTTAATCACAATGGGGCTATTGTAGAAGCAAAGCCTCTAGTTTATGAGTGTGGGCCTAAATGCAAGTGCCCTTTAACCTGCCATAACAGAGTCAGCCAACTTGGCATAAAGATGCAACTCGAAATTTTTAAAACCAATTCAAGGGGATGGGGTGTAAGATCCCTAAATTCCATCTCATCAGGAAGTTTTATCTGTGAATATATAGGAGAGGTTCTTGAAGACAAAGAAGCTGAACAAAGAACTGGTAATGACGAGTATCTTTTTGATATTGGAAATAACAACAGCAACAATACTCTTTGGGATGGACTTTCGACCCTTATGCCAGAGTCGCAGTCACATTCTTGTGAAATAGTGAAGGATGTTGGCTTCACCATCGACGCTGCTAAGTTTGGTAATGTGGGGAGATTCGTCAATCATAGTTGCTCCCCTAATCTTTATGCTCAGAATGTCCTTTACGATCATCATGACAGCAGGATTCCTCACATCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGATTACAATTATATGATAGATCAAGTCCGTGATTCTAACGGCAATATTAAAAAGAAGAATTGCTATTGTGGTTCCGTGGAATGTACTGGTAGGTTGTATTAA 3234 0.4134 MNLESSRGMAMSAGNGHSEEEFRKPLMENEDSTVLAQPKFKRRKVSAIRDFPAECGPFCSGVGPILIVNNGGFGSVNGTIVEDKSGEHFGGEAENDPQDSEFKNNSLLTETPDQTSDCGLKEGNPVVSSHQVDGTTLANNGPAKVALVGMETLDMEISTEDSSLEKENPVVSSHQVDGPTFVNHRHAKVASVSMEALDAEFATEGCSLKNENPVVSSHLVDGSTLANDERAKLALVGMETLGMEFATENSVKQDFSYISKSSSPVGEVAMSDDLKSSSSNINIGGSGACVEEAITRRYPPRRKIAAVRDFPRLCGRNAPRLSKDECLKEISLNKNRVGLQDLALDVGPFKKVAAANIKELENNIPLEHGYKRKLADIVQADSEGNDTREKYIKLPEKRNHHQVNINSKAVAKEEMKDIVLAEGTSALDIVYPEVRSPEGKLNVSSGRKVVLGLMSKSECPWRSDNDCSKFKSIEGTNERKRKKVDFYAQIDRSKTAIKTKLVPNHSGHNSLKKKKGNSTSDGMGQLVIREKDSLGPNENNKDFKSVPKPLSVIVPPLGNSDFSGHVNDSVTRNKVRQTLRLFQAVSRKLLQEVEAKSSERERKRIDLQAAKILKENGNYVNTGKQLLGPVPGVEVGDEFQYRVELNMIGLHRQTQGGIDYLKHNGKILATSIVASGGYADELDNSDVLIYTGQGGNVMTTGKEPEDQKLERGNLALKNSSEEKNPVRVIRGSESMDGKSKTYVYDGLYLVESHWQDMGPHGKLVYRFRLRRIPGQPELALKEVKKSKKFKTREGLCVEDISYGVERIPICAVNIIDDEKPPPFKYITSMMYPDCCNLVRPEGCNCTNGCSDLDKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPLTCHNRVSQLGIKMQLEIFKTNSRGWGVRSLNSISSGSFICEYIGEVLEDKEAEQRTGNDEYLFDIGNNNSNNTLWDGLSTLMPESQSHSCEIVKDVGFTIDAAKFGNVGRFVNHSCSPNLYAQNVLYDHHDSRIPHIMLFAAENIPPLQELTYDYNYMIDQVRDSNGNIKKKNCYCGSVECTGRLY 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00339 1077 Gene3D - 610 791 IPR036987 -
Car08g00339 1077 Gene3D SET domain 792 1077 IPR046341 -
Car08g00339 1077 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 526 1076 - -
Car08g00339 1077 Pfam SET domain 915 1047 IPR001214 GO:0005515
Car08g00339 1077 ProSiteProfiles Post-SET domain profile. 1061 1077 IPR003616 -
Car08g00339 1077 SMART PostSET_3 1061 1077 IPR003616 -
Car08g00339 1077 SMART G9a_1 623 775 IPR003105 -
Car08g00339 1077 ProSiteProfiles SET domain profile. 904 1047 IPR001214 GO:0005515
Car08g00339 1077 Pfam Pre-SET motif 800 896 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car08g00339 1077 SMART preset_2 797 888 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car08g00339 1077 CDD SET_AtSUVH-like 821 1048 - -
Car08g00339 1077 Pfam SAD/SRA domain 627 775 IPR003105 -
Car08g00339 1077 SUPERFAMILY SET domain 787 1048 IPR046341 -
Car08g00339 1077 SUPERFAMILY PUA domain-like 609 784 IPR015947 -
Car08g00339 1077 SMART set_7 904 1053 IPR001214 GO:0005515
Car08g00339 1077 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 493 1077 IPR025794 GO:0016571
Car08g00339 1077 ProSiteProfiles YDG domain profile. 628 771 IPR003105 -
Car08g00339 1077 ProSiteProfiles Pre-SET domain profile. 841 901 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car08g00339 1077 MobiDBLite consensus disorder prediction 503 524 - -
Car08g00339 1077 MobiDBLite consensus disorder prediction 1 34 - -
Car08g00339 1077 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 526 1076 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00339 Car-Chr8 2669384 2674187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00339 572 1076 Su(var)3-9 homologs AT5G04940 41.603 6.68e-121 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car08g00339 SAD_SRA 7.3e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00339 K11420 - gmx:100803378 1328.15