Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00324 ATGTACGGAGAGAGTTGTTACGAATCCGATTTGGCTCTTTTGGACTCCATACGCCGTCACTTGCTCGGAGATTCTGACGTTTTAACATTCGGAGCTCCGAATGTGAATTCGGATAATGCTCCATTTTTATGTCGGAGCTCCAGTTTCAATAACTTGTACCCGTGTCTGAGTGAGAATTGGGGCGAACTTCCACTGAAAGAAGACGATTCAGAAGATATGGTACTTTACAGTGTACTTTGTGATGCTGTTGATTTTGGGTGGGTCCCATCTCTCGACGCAGGCTCACCGGAGAGCTTTTCATCGGATGTCATGACGCCGGTTATGGTTAAATCGGAGCCGGAGGATGTTTTCCCGGTGGTGCAGCGTTTGCCTGAGATGATTGTTTCCGATCCGGTGGTTGTTCCGGCGAAGGGGAAGCATTACCGAGGAGTGCGGCGACGGCCGTGGGGAAAATATGCAGCGGAGATTCGTGACCCGGCTAAAAATGGGGCGCGGGTTTGGCTTGGAACTTTTGAAACGGCTGAGGATGCAGCTTTGGCTTATGATCGAGCCGCGTATAGAATGCGCGGCTCGAGAGCTATGTTGAATTTTCCACTTCGGGTTAATTCGGGTGAGCCTGACCCGGTTAGAGTGCCGGCGAAGAGGTCCTCATCGTCATCGGAGTCTTCTTCATCGTCGGAGAGTGGGTCGGCTGCGAAACGGAGGAAGATGGTGGAGCCGATGGTGACGGCTCAAGTTGAATTGAAAATGGGCCAAGTGGCACAATGCTGA 771 0.5162 MYGESCYESDLALLDSIRRHLLGDSDVLTFGAPNVNSDNAPFLCRSSSFNNLYPCLSENWGELPLKEDDSEDMVLYSVLCDAVDFGWVPSLDAGSPESFSSDVMTPVMVKSEPEDVFPVVQRLPEMIVSDPVVVPAKGKHYRGVRRRPWGKYAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRAMLNFPLRVNSGEPDPVRVPAKRSSSSSESSSSSESGSAAKRRKMVEPMVTAQVELKMGQVAQC 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00324 256 Pfam AP2 domain 140 190 IPR001471 GO:0003700|GO:0006355
Car08g00324 256 Gene3D AP2/ERF domain 139 201 IPR036955 GO:0003700|GO:0006355
Car08g00324 256 PANTHER DNA-BINDING DOMAIN 26 222 IPR044808 GO:0003700|GO:0009873
Car08g00324 256 PRINTS Ethylene responsive element binding protein signature 141 152 IPR001471 GO:0003700|GO:0006355
Car08g00324 256 PRINTS Ethylene responsive element binding protein signature 164 180 IPR001471 GO:0003700|GO:0006355
Car08g00324 256 SUPERFAMILY DNA-binding domain 140 200 IPR016177 GO:0003677
Car08g00324 256 MobiDBLite consensus disorder prediction 213 231 - -
Car08g00324 256 MobiDBLite consensus disorder prediction 203 242 - -
Car08g00324 256 SMART rav1_2 140 204 IPR001471 GO:0003700|GO:0006355
Car08g00324 256 CDD AP2 139 198 IPR001471 GO:0003700|GO:0006355
Car08g00324 256 PANTHER BNAANNG21280D PROTEIN 26 222 - -
Car08g00324 256 ProSiteProfiles AP2/ERF domain profile. 140 198 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00324 Car-Chr8 2576128 2577441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00324 8 256 AP2-EREBP Transcription Factor Family AT4G17500 51.111 2.59e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car08g00324 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00324 K09286 - gmx:100819649 333.954