Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00306 ATGGGGTTGGTAGAAGATGTGACATTAATTGGAGGGTTGATAGGAGTTCAATTTATCTATGCAGGAAATGCTGAGCTAATGAGTTATTCAATGTCATTAGGCATTAGCCCTCTTACCATTGTTGTTTTCACTTCCATTGCTACATTCCTTATTCTCTTCCCCGCTGCATTTTGTTTTGAAAGGAGAAACTGGCCCAAGAATTGCAGTTTAAAGTTTATAATGCAGATATGGTTTCTTTCATTTGGAGGATTAGCTTTCCAGTCTTTATTCCTCAAAGGAATCAGTTTAACTTCACCAGCAATGGGAACTGCTATGCCAAACCTTGCCCCAGGTCTTATCTTCATCATCGCATGGACTTTTGGGTTAGAGAGAGTTAACGTAAACAACAGGTATAGTAAAATTAAAATCTTAGGAACATTGCTATGTGTTTTGGGTGCTTTCACAATGAGCATAATGCAAAGCATTTCTGCTCCTCCTGCAACCAAAAAAGAGACTACAATCCAATCGTTGTCAACACCATCAGATTTTCTCTTTGACATACAAAAGATAATCGGTTGCCTCTATCTAATGGCTTCAGTTTTAATATTATCAAGCAATGTTGTTCTGCAGGCTTTTGCTCTTGGAGATTTTCCTGCACCAATGTCATTGAGTGCAATAACGTCCTTGTTTGGAGGATTTATGACTGCAGCTGTTCAATTATTTGAAGGCGAGGAACTTAAAACTGGGTTGCAACTTGTTAGTTTTGGAGACCTGGTTGGCTTTTCCCTTCTGGCTGGTGGAGTGAGTGGAATAAGCTTAAGCTTCAATGGATGGGCACTTAAGAAGAGAGGACCTGTATTTGTCTCCATGTTTAGCCCTATTGGAACAGTATGCTCAGTTATTTTCTCTGTCTTTACTCTAGGAGACACTGTTAACATTGGAAGCATTGGTGGTATGTTCCTCATGTTCAGTGGACTTTACTTAGTTCTTTGGGCCAAAGGGAAAGAAGGATATGCAGATGGTGGTGATTTATCAGAAAAAGCTTGA 1026 0.3957 MGLVEDVTLIGGLIGVQFIYAGNAELMSYSMSLGISPLTIVVFTSIATFLILFPAAFCFERRNWPKNCSLKFIMQIWFLSFGGLAFQSLFLKGISLTSPAMGTAMPNLAPGLIFIIAWTFGLERVNVNNRYSKIKILGTLLCVLGAFTMSIMQSISAPPATKKETTIQSLSTPSDFLFDIQKIIGCLYLMASVLILSSNVVLQAFALGDFPAPMSLSAITSLFGGFMTAAVQLFEGEELKTGLQLVSFGDLVGFSLLAGGVSGISLSFNGWALKKRGPVFVSMFSPIGTVCSVIFSVFTLGDTVNIGSIGGMFLMFSGLYLVLWAKGKEGYADGGDLSEKA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00306 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 328 - -
Car08g00306 341 Pfam EamA-like transporter family 15 150 IPR000620 GO:0016020|GO:0016021
Car08g00306 341 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Car08g00306 341 PANTHER WAT1-RELATED PROTEIN 9 340 IPR030184 GO:0016021|GO:0022857
Car08g00306 341 PANTHER WAT1-RELATED PROTEIN 9 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00306 Car-Chr8 2429444 2433540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00306 3 333 Nodulin-like Gene Family AT5G47470 58.258 1.17e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00306 - - aprc:113870214 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00306 08 2429444 2433540 Car07g01249 07 11334213 11337875 PCT