Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00305 ATGGCTTCGAATCCTCCATTTCACGTGGAAGATCAGACCGATGAAGATTTCTTTGATAAACTTGTTGAGGATGATTTGGTGGAGCCTGTTAAGTCTGGTAATTATGAAGGGAATGATTCTGATGATGCTAAAGCGTTTGCGAATCTGAGTATCAGTGATGTTGATGCTGCTGCATTTGAGAATTCTGATTTTGGGGAAAGTGGGGTTGAACTCCAAGAGGAATTAGGTACTGTAAAATCTGATGTGGATTTGGTTGGTGGACATGATGATGACAAGGAGGGAAGTTTGTTGAAGGCTTCTAGTTCAGTTGAGTGTGATAGTAAGATTGATCTCAGTAATAAAGAGATTGGGACGGGATTGGAGGTTACGGCGGTTGCAACTGTTGTGGAGAGCAATGAGATTGCTAGTTCAGGGATTAAGGAGAAGGATTGGAATTCTTTTCATGCTGATGCAAATGGAGACATTGGGTTTGGATCATATTCTGACTTTTTCAGTGAGTTGGGAGATCAATCTGCTGATTTTCCGGTGATTTCCCACGATAATTTAAATAGTCAGGCGATTCCTAGTAATGAAGTTCAAACCGATGGCTTTAATACTTCAGTTGATTACTTGCAGCATCAAGGGGTTCAAGGTTATGGTAGTTCTTTTGAAAATCACACGGACAAACAAGTTGATGGCTTAAATACTTCGGTCAATTATGTGCAATATCCAGAGGGGGGAACTTATGATGCATCTTCAGGCCAACACAATAATGGACAAGATCTGAGTAGTAGTCAGAATTGGGAGGATCTTTATCCTGGATGGAAGTATGACCATACCACTGGGCAATGGTGTCAAATAGATGGCTACGACACAACAGCTACTAGTCAACAAACCGCTGAAGCCAACACACCTGCGGATTGGGCCTCTGAAGCCAATACAGCTGTGGATTGGGCTGCTGCTTCTGATGGAAAAACCGAGATCTCTTATGTGCAGCAAACTGCACAGTCGGTTGCTGGAACTTTGGCAGAAACTGGCACAACTGAAAGTGTATCTAGCTGGAATCAGGTTTCACAAGGAAATAATGGGTACCCGGAGCATATGGTTTTTGATCCTCAATATCCTGGTTGGTATTATGACACAATTGCCCAAGAATGGCGCTCATTGGAAACTTACAATTCATCCATACAGTCTTCTGTTCATGGACTTGAAAATGGGCATACTTCTACCAATACTTTCTCCCTTAACGATAATAACAGTTTGAATAGTGAGTATACCCAAGCTGGTAATTATGGATCACAGGGTGTCGGTAGTCAAGCTGTAGATGGTAGCTGGGGTGGTTCATATGGTGTTAACCAGCAAGTTAATCATTCTTATGGTTCAAGTATGTCTGGGTTCAATGATCAAGAAAGTACTTCTAGTTCCTTTGGATCAGTTTCATTATACAAAAACAATGGAAACCATGCTCATGGTTTGACTAATGGAACTTTTGAACCAAAAACTTTTGTCCCTGGTGGGGACAATTTTCATCAATTTAATTATTCACATACAAATTTTGATGAAAAAAAACAATTCTCGAATGTTTTTGCTGAAAATCAGAACTCCCAGAGTTACTCCCAGCCATCAATCCAGGGTGGATATCAATATTCGTATGCCCCTCATGCTGGAAGATCATCCGCTGGACGTCCTTCTCATGCGCTTGTAACATTTGGATTTGGTGGAAAACTCATCGTAATGAAAGATCCAAGTGTTTTGAATGCATCATATGGAAGCCAGGATTCTGTACAAGGTTCCATTTCTGTGCTGAACTTGACGGAAGTTGTCACGGGAAGCATCAATTCTTCTACTATTGGAAATGCTACTGGTGATTATTTTCGTGCTCTAAGCCAGCAATCTTTCCCAGGTCCATTGGTTGGTGGTAGTGTTGGAAGTAAGGAGCTGTACAAATGGTTAGATGAGAGGATTGCACGCTGCGAATCACCTGATATGGATTATAAGAAAGGTGAAAGGTTGAGACTCCTCCTCTCCTTGCTTAAAATAGCTTGTCAGCATTATGGAAAACTACGTTCTCCTTTTGGTACAGATACCATACTGAAAGAAAATGATGCTCCCGAGTCGGCAGTTGCAAAGCTTTTTGCATCTGCCAAAGTTAGTGGCACAAAGTTCACTCAATATGGGATGCCAAGTCATTGCTTGCAAAATTTGCCTTCTGATGAACAAATGAGGGTAATGGCTTCGGAAGTACAAAATCTTCTTGTCTCTGGGAAAAAGATGGAGGCTTTACAGCATGCACAAGAAGGACAATTGTGGGGACCTGCACTTGTTCTTGCTTCACAACTCGGTGAGCAGTTCTACGTTGAGACAGTAAAGCAAATGGCACTCCGCCAGTTGGTTGCGGGGTCACCTCTACGCACATTATGCCTTTTAATTGCTGGCCAACCAGCTGAAGTATTCTCTACTGGAACCTCTATTAGTGGACAACCTGGTGCTTTTAATTTGCCTCAGCAGTCTGAACAGGTTGCATGTAATGGTATGCTTGATGATTGGGAGGAGAATCTGGCTGTAATTACTGCAAACAGAACCAAAGGTGACGAGCTTGTAATTATTCACCTTGGTGATTGCTTGTGGAAGGAAAAAAGGGAGATTACGGCTGCACACATCTGCTATTTAGTTGCTGAAGCAAATTTCGAGTCATACTCAGACAGTGCAAGACTTTGCTTAATAGGAGCAGATCACTGGAAATGTCCTCGAACTTATGCTAGTCCAGAAGCTATTCAGAGGACTGAGTTATATGAATATTCAAAGCTGCTTGGAAACTCTCAGTTTGTTTTGCATTCATTTCAACCATATAAGCTTATATATGCGTATATGCTTGCTGAAGTGGGAAAGGTTTCAGACTCATTGAAATACTGTCAAGCAGTACTGAAATCCTTGAAAACTGGCCGTGCTCCAGAAGTAGAAACGTGGAAACAGATGGTATTATCTCTTGAGGAGAGAATTAGGACCCACCAACAGGGTGGATATGCTGCAAATTTAGCTCCTGCAAAATTAGTTGGCAAATTGCTTAACTTTTTTGATAGCACTGCCCATCGGGTTGTTGGCAGTTTACCACCACCTGGTCCATCATCATCACAAGGAACTGTTCACGGAAATGAACAACATTACCAGCATATGGCACCAAGAGTACCCACTAGCCAGTCAACAATGGCCATGTCATCTTTAGTTCCATCTGCTTCAATGGAACCCATAAGTGAGTGGACAGCTGACAATAATCAAATGCCCAAGCCTAATAGAAGTGTTTCAGAGCCAGATATTGGTAGAAGCCCAAGACAGGAAACGACATCGTCTGATGTACAAGGAAAAGTCCAGGTATCGGGGGGTGCATCACGCTTTCCTCGTTTTGGTTTTGGGTCACAACTTCTGCAAAAAACAGTGGGGCTAGTCTTGGGACCTCGCTCTGGTAAACAGGCTAAATTGGGCGAGAAAAACAAGTTCTATTATGACGAAAAGCTGAAGAGATGGGTAGAGGAAGGTGCTGAAGTTCCAGCTGAAGAAGCCGCTCTGCCACCACCACCTCCGACAACTGCTGCTTTCCAGAATGGTTCAACTGAATACAACTTGAAATCTGCGTTGCAAACAGAAGGTTCGTCTCTGAATGAGTTCTCGAGCACAAGAACTTCAAGTCCTGAACCTAGTCCAGGGATGCCACCGATACCACCTAGCTCAAACCAATTCTCTGCTCGCAGTCGCTTAGGTGTTCGGTCAAGATATGTTGACACCTTCAACCAAAATGGTGGAAACTCCGCAAACTTGTTTCACTCCCCTTCCGTTCCACCCGTGAAACCTGCTCTTCCTGCCAATGCAAAGTTTTTTGTTCCAGCTCCTGTACCATCATCAAATGAGCGAAATATGGAGGCTATTGCCGAAAGCAACCTAGAAGATAGTGCAGCTAATGAAGATCCTTCTACATCTTCAACAAATGATTGGTCATACCATTCTCCGAAACATGCACAACCACAAACGATGACCATGCAAAGGTTTCCAAGTGCAGGCAACATCTCAAACCAGGGACAGATAGATGGCAGTAACTCTCATTTTGCGCATTCTCGTCGAACAGCTTCATGGAGTGGAAGTTTTAATGATTCATTTAGCCCTCCAAAAATGGGTGAAATTAAGCCTTCAGGTGAAGTTTTGGGCATGCCAACATCAACATTTATGCCTGATCCATCTTCAATGCAATCGACTATGAAAAAAAATAGCAGTTTTGGTGAAGATCTTCAAGAGGTTGAACTATGA 4275 0.4274 MASNPPFHVEDQTDEDFFDKLVEDDLVEPVKSGNYEGNDSDDAKAFANLSISDVDAAAFENSDFGESGVELQEELGTVKSDVDLVGGHDDDKEGSLLKASSSVECDSKIDLSNKEIGTGLEVTAVATVVESNEIASSGIKEKDWNSFHADANGDIGFGSYSDFFSELGDQSADFPVISHDNLNSQAIPSNEVQTDGFNTSVDYLQHQGVQGYGSSFENHTDKQVDGLNTSVNYVQYPEGGTYDASSGQHNNGQDLSSSQNWEDLYPGWKYDHTTGQWCQIDGYDTTATSQQTAEANTPADWASEANTAVDWAAASDGKTEISYVQQTAQSVAGTLAETGTTESVSSWNQVSQGNNGYPEHMVFDPQYPGWYYDTIAQEWRSLETYNSSIQSSVHGLENGHTSTNTFSLNDNNSLNSEYTQAGNYGSQGVGSQAVDGSWGGSYGVNQQVNHSYGSSMSGFNDQESTSSSFGSVSLYKNNGNHAHGLTNGTFEPKTFVPGGDNFHQFNYSHTNFDEKKQFSNVFAENQNSQSYSQPSIQGGYQYSYAPHAGRSSAGRPSHALVTFGFGGKLIVMKDPSVLNASYGSQDSVQGSISVLNLTEVVTGSINSSTIGNATGDYFRALSQQSFPGPLVGGSVGSKELYKWLDERIARCESPDMDYKKGERLRLLLSLLKIACQHYGKLRSPFGTDTILKENDAPESAVAKLFASAKVSGTKFTQYGMPSHCLQNLPSDEQMRVMASEVQNLLVSGKKMEALQHAQEGQLWGPALVLASQLGEQFYVETVKQMALRQLVAGSPLRTLCLLIAGQPAEVFSTGTSISGQPGAFNLPQQSEQVACNGMLDDWEENLAVITANRTKGDELVIIHLGDCLWKEKREITAAHICYLVAEANFESYSDSARLCLIGADHWKCPRTYASPEAIQRTELYEYSKLLGNSQFVLHSFQPYKLIYAYMLAEVGKVSDSLKYCQAVLKSLKTGRAPEVETWKQMVLSLEERIRTHQQGGYAANLAPAKLVGKLLNFFDSTAHRVVGSLPPPGPSSSQGTVHGNEQHYQHMAPRVPTSQSTMAMSSLVPSASMEPISEWTADNNQMPKPNRSVSEPDIGRSPRQETTSSDVQGKVQVSGGASRFPRFGFGSQLLQKTVGLVLGPRSGKQAKLGEKNKFYYDEKLKRWVEEGAEVPAEEAALPPPPPTTAAFQNGSTEYNLKSALQTEGSSLNEFSSTRTSSPEPSPGMPPIPPSSNQFSARSRLGVRSRYVDTFNQNGGNSANLFHSPSVPPVKPALPANAKFFVPAPVPSSNERNMEAIAESNLEDSAANEDPSTSSTNDWSYHSPKHAQPQTMTMQRFPSAGNISNQGQIDGSNSHFAHSRRTASWSGSFNDSFSPPKMGEIKPSGEVLGMPTSTFMPDPSSMQSTMKKNSSFGEDLQEVEL 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00305 1424 MobiDBLite consensus disorder prediction 1304 1424 - -
Car08g00305 1424 MobiDBLite consensus disorder prediction 1054 1073 - -
Car08g00305 1424 CDD ACE1-Sec16-like 626 997 - -
Car08g00305 1424 MobiDBLite consensus disorder prediction 1079 1116 - -
Car08g00305 1424 MobiDBLite consensus disorder prediction 1308 1376 - -
Car08g00305 1424 MobiDBLite consensus disorder prediction 1206 1222 - -
Car08g00305 1424 MobiDBLite consensus disorder prediction 238 259 - -
Car08g00305 1424 PANTHER RGPR-RELATED 1 1419 IPR024880 GO:0006914|GO:0048208
Car08g00305 1424 MobiDBLite consensus disorder prediction 1206 1240 - -
Car08g00305 1424 Gene3D - 554 984 - -
Car08g00305 1424 Pfam Sec23-binding domain of Sec16 741 999 IPR024298 -
Car08g00305 1424 MobiDBLite consensus disorder prediction 1397 1415 - -
Car08g00305 1424 PANTHER SECRETORY 16, ISOFORM I 1 1419 - -
Car08g00305 1424 Pfam Vesicle coat trafficking protein Sec16 mid-region 558 679 IPR024340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00305 Car-Chr8 2407130 2415164 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00305 K20353 - gmx:100795053 2056.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00305 08 2407130 2415164 Car07g01247 07 11300258 11311243 PCT