Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00304 ATGCAACTTTCAATAATGAATACGGCTACTATTTTCAATTCTTTTCAATTACTTTTGATTTTCACTTGCATGTTGTTAATTAATGCAGCAATAGTGACACAAGGTGCACGCTATCATCACGAAAGTACCTTCAACTATTTATCCTCTACAAACATTTCCAACCAGAACCACCACTGGATTGGACCCATCGGTCACCGTGTAATCACCGTTGATGTTAACGGTGGAGGTCAGTTCCGGTCCGTTCAAGAAGCCGTTAATGCCGTACCGGACAACAATAGAATGAATGTCCTTATTCAAATCAGTGCCGGATACTACATAGAGAAGGTGGTGGTGCCGGGGACGAAGCCATACATTACGTTTGAAGGAGAGGGGAGGGAAGTGACGGTGATAGAATGGCATGATAGAGCGAGTGATCCTGGTCCCAACGGACAACAACTACGTACTTATAGAACTGCTTCTGTAACTGTCTTTGCTAATTATTTCTCTGCTAAAAATATCACTTTCAAGAACACAGCGCCGGCACCAATGCCCGGGATGCAAGGATGGCAAGCGGCGGCGTTTCGGATATCAGGTGACAAAGCATACTTTTCCGGGTGTGGTTTCTACGGCGCACAAGATACACTTTGCGACGACGCTGGTAGGCATTACTTTAAGGAGTGTTACATTGAGGGTTCCATTGATTTTATTTTTGGAAATGGAAGATCCATGTACAAGGATTGCGAGCTACATTCAATAGCAACGAGGTTCGGGTCCATAGCAGCCCAGGATAGGAAATACCCATACGAGAAGACAGGTTTCGCATTCGTACGTTGCAGGGTGACAGGTACAGGCCCACTATATGTGGGCCGTGCAATGGGCCAGTATTCAAGAATAGTATACGCATACACATACTTCGATAATATAGTTGCACACGGCGGTTGGGATGATTGGGACCACGCCAACAACAAAAACAAGACTGTGTTCTTTGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAGGCCGTGCGTGGGGTCTCATGGGCAAGGGAATTGGATTTCGAATCTGCGCATCCATTTCTCGTTAAGAGTTTCGTCAATGGAAGACACTGGATCGCACCCACTGATGCTTAG 1110 0.4604 MQLSIMNTATIFNSFQLLLIFTCMLLINAAIVTQGARYHHESTFNYLSSTNISNQNHHWIGPIGHRVITVDVNGGGQFRSVQEAVNAVPDNNRMNVLIQISAGYYIEKVVVPGTKPYITFEGEGREVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSAKNITFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRKYPYEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYAYTYFDNIVAHGGWDDWDHANNKNKTVFFGVYKCWGPGAEAVRGVSWARELDFESAHPFLVKSFVNGRHWIAPTDA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00304 369 Pfam Pectinesterase 68 360 IPR000070 GO:0030599|GO:0042545
Car08g00304 369 PANTHER PECTINESTERASE 68-RELATED 29 368 - -
Car08g00304 369 SUPERFAMILY Pectin lyase-like 65 367 IPR011050 -
Car08g00304 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 368 - -
Car08g00304 369 ProSitePatterns Pectinesterase signature 2. 222 231 IPR033131 -
Car08g00304 369 Gene3D - 64 369 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00304 Car-Chr8 2400405 2402916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00304 55 369 Carbohydrate Esterase AT5G47500 79.874 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00304 - - cam:101501763 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00304 08 2400405 2402916 Car08g00304 08 2400405 2402916 ECH