Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00284 ATGTTGAAGCGACCCGGCCGCCAGCTATCTTCGCCGGCGCCGGAGTCGCTCCCCGATAAGATCTATCAGTTCCGCGGTGCCTTCCTGATGGTTGCACTCCCTCTCCTCCTCGTCACGCTCGTTCTTTACTTCATGCCTTCTGCCTCTTCCAACGAGTCCGTTGAGGTTTACGCTCTCACGCACCGTAAATTTTCTCCCGATCGTAAACCGGCCGATTCGTTCGCCGTCATCTTTGACGCTGGTAGCTCCGGCAGCCGCGTCCACGTCTTTCGTTTCGATCGGAACCTTGATCTCGTTCCTATTGGCAAAGATCTCGAGGTTTTCTTGCAGATAAAACCTGGTTTGAGTGCTTATGCACAGGACCCACAACAGGCAGCGGAATCTCTTGTTTCTCTTTTGGACAAAGCTGAAAGCGTTGTTCCTATGGAGTTTCGCGCAATGACACCCGTTAGAGTTGGGGCAACTGCAGGATTGAGGGCTTTGGAAGGGGATGCTTCTGATAGGATTTTGCAAGCGGTCCGAGATTTGCTTAAGCAAAGAAGTACTCTAAAATCTGAGCCTGATGCGGTTGCTGTGCTAGATGGAACCCAAGAAGGTGCTTTTCAATGGGTGACTATTAACTATCTACTGGGAAAATTGGGAAAAGATTATTCAGATACTGTTGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATACGCCATCTCAGAGGATAGTGCTGCCAAGGCTCCAAAAGCTCTGGATGGAGAAGACCCCTATGTCAAGGAGATGTTCCTACGGGGAAGGAAATATTACCTCTATGTTCATAGTTACTTACGCTATGGTTTACTAGCAGCTCGTGCAGAGATTTTAAAGGTTTCTGATGATTCTGGAAACCCTTGCATCTTAGCTGGCTATGATGGATCTTACAATTATGGAGGAAAGTCATTTAAGGCCTCGTCCTCCTCCTCTGGTTCAAGCTTGAATGAATGCAAAAGCATAACTCTTAAGGCTCTCAAAGTTAATGAATCAACATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGCGGCGGCGGCGATGGACAGAAGAACCTTTTTGTTGCCTCATTCTTCTTTGACCGGGCTGCTGAGGCTGGTTTTGCTGATCCAAAATCACCCGTTGTGAAAGTTCGTCCTGCTGATTTTGAGGACACAGCAAAGCGAGCTTGTCAAACAAAACTCGAAGATGCTAAATCCATTTATCCACATGTTGAGGAGGGGAACCTTCCATATTTATGCCTGGATCTTGTATACCAGTATACATTGCTTGTTGTTGGATTTGGTAAGTTTTGCGCTGGTTTTGGAACAGTTGTGCATGGTAATGATGCTTTCCGCAATATCTATGGTGTTATTTCGATGCACTTATTTATTTTCTTTTGA 1413 0.4643 MLKRPGRQLSSPAPESLPDKIYQFRGAFLMVALPLLLVTLVLYFMPSASSNESVEVYALTHRKFSPDRKPADSFAVIFDAGSSGSRVHVFRFDRNLDLVPIGKDLEVFLQIKPGLSAYAQDPQQAAESLVSLLDKAESVVPMEFRAMTPVRVGATAGLRALEGDASDRILQAVRDLLKQRSTLKSEPDAVAVLDGTQEGAFQWVTINYLLGKLGKDYSDTVGVVDLGGGSVQMAYAISEDSAAKAPKALDGEDPYVKEMFLRGRKYYLYVHSYLRYGLLAARAEILKVSDDSGNPCILAGYDGSYNYGGKSFKASSSSSGSSLNECKSITLKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPKSPVVKVRPADFEDTAKRACQTKLEDAKSIYPHVEEGNLPYLCLDLVYQYTLLVVGFGKFCAGFGTVVHGNDAFRNIYGVISMHLFIFF 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00284 470 PANTHER APYRASE-LIKE PROTEIN 1 441 - -
Car08g00284 470 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 193 208 IPR000407 GO:0016787
Car08g00284 470 Gene3D Exopolyphosphatase. Domain 2 194 439 - -
Car08g00284 470 CDD NBD_sugar-kinase_HSP70_actin 76 235 - -
Car08g00284 470 Gene3D - 74 193 - -
Car08g00284 470 Pfam GDA1/CD39 (nucleoside phosphatase) family 71 439 IPR000407 GO:0016787
Car08g00284 470 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 441 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00284 Car-Chr8 2236308 2239981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00284 15 439 Calmodulin-binding Proteins AT3G04080 67.529 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00284 K14641 - gmx:100804818 687.567