Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00282 ATGGCAGCCAGAGCAAAGGTTTCTTTACTGGTCCTCATCATGAGCCTTGTCAGTTACATGGTTGGAACCACAGAATCCTCTATAACCCCAACAGAGTTCATCAGGTCCTCATGTGAGGCTACTAGTTACCCTGCTTTATGCGTTCAATGTCTCACGGGGTATGCAAGCGCGATCGGCCAAAGTGATCAACAACTAGCCATAACTGCTATATCAGTGAGCATATCCAGGACACAGTTGAGTGCATCATTTGTGAATACGATGTCAAAATCAAGGGGCATCAAGCAAAGGGAGTACAGAGCCATGCAAGACTGCATAGAAAACATGGCTGACAGTTTGGACAGACTCAGCAAATCGGTAACGGAGCTAGGCAATATCGGTCATGCTGTTGGAGAGGACTTCAGGTGGCACATGAGCAACGTGCAAACTTGGGTTAGCGCTGCCCTTACCGATGATGACAGTTGTCTTGATGGCTTTACTGATCTTTTCATGAATGAAAATGTTAAGGCTGCCATCAAGGACAAGGTTGTCAATGTTGCTCAAGTCACCAGCAATGCACTCGCTTTGGTTAATCGCTTTGCCTCAAACCATCGAACTGCCGAAACTCCTTAA 609 0.4647 MAARAKVSLLVLIMSLVSYMVGTTESSITPTEFIRSSCEATSYPALCVQCLTGYASAIGQSDQQLAITAISVSISRTQLSASFVNTMSKSRGIKQREYRAMQDCIENMADSLDRLSKSVTELGNIGHAVGEDFRWHMSNVQTWVSAALTDDDSCLDGFTDLFMNENVKAAIKDKVVNVAQVTSNALALVNRFASNHRTAETP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00282 202 CDD PMEI-like_3 36 194 - -
Car08g00282 202 Pfam Plant invertase/pectin methylesterase inhibitor 33 188 IPR006501 GO:0004857
Car08g00282 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 196 - -
Car08g00282 202 PANTHER PECTINESTERASE INHIBITOR 9 11 196 - -
Car08g00282 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 192 IPR035513 -
Car08g00282 202 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 190 IPR006501 GO:0004857
Car08g00282 202 SMART PMEI_2 29 188 IPR006501 GO:0004857
Car08g00282 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 193 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00282 Car-Chr8 2223978 2224985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00282 34 189 Carbohydrate Esterase AT3G14310 30.189 1.63e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00282 - - mtr:MTR_5g012000 289.271