Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00267 ATGGAAGAAGGAGGAGGTGGTGGTTCCGGCGGCGATAATTCTAATGAAATGTCAAGaagaccaagaggaagaccagccggatccaaaaacaaaccaaaaccGCCTATCATCATCACACGTGACAGCGCAAACGCTTTAAAGACTCACGTCATGGAAGTTGCTGACGGTTGCGACATAGTCGAAAGCGTCAACAACTTCGCAAGACGTCGTCAGAGAGGCGTTTGCATCATGAGTGGTACTGGAACCGTTACCAACGTAACACTCAGGCAACCGGCTTCCCCTGGAGCGGTAGTCACTCTTCATGGAAGGTTCGAGATTCTGTCGCTAGCCGGATCGTTTCTTCCTCCGCCTGCTCCGCCGGCTGCTTCAGGTTTGACTATATATTTGGCGGGCGGACAAGGTCAGGTTGTTGGAGGAAGTGTTGTTGGTGCTTTGATTGCTTCTGGACCTGTTGTTATTATGTCTGCTTCTTTTAGTAACGCCGCTTATGAGAGACTTCCTTTGGAAGATGATGATGGTTCTAATTCGATGCAACTTCAAGGCGGCGGTGGCGGTGGTTCCCCAAGTGGTGGTGGTGGAGTTCCGCAACAACAGACACAGCTATTAGGAGATGCAACTGCTCCACTTTTTCAAGCTATGCCTCCTCCTAATCCTAATCATAATATTCTCAGTTCAGTTCAGATGCCTTCGGAGACTTTCTGGCCAACCGGTCGTTCTCCTTATTGA 726 0.4656 MEEGGGGGSGGDNSNEMSRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVNNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEDDDGSNSMQLQGGGGGGSPSGGGGVPQQQTQLLGDATAPLFQAMPPPNPNHNILSSVQMPSETFWPTGRSPY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00267 241 ProSiteProfiles PPC domain profile profile. 43 180 IPR005175 -
Car08g00267 241 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 8 241 - -
Car08g00267 241 Gene3D - 46 180 - -
Car08g00267 241 MobiDBLite consensus disorder prediction 1 36 - -
Car08g00267 241 PIRSF ESCAROLA 4 241 IPR014476 GO:0003680
Car08g00267 241 SUPERFAMILY AF0104/ALDC/Ptd012-like 43 171 - -
Car08g00267 241 CDD DUF296 47 114 IPR005175 -
Car08g00267 241 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 241 IPR014476 GO:0003680
Car08g00267 241 Pfam Plants and Prokaryotes Conserved (PCC) domain 47 160 IPR005175 -
Car08g00267 241 MobiDBLite consensus disorder prediction 217 241 - -
Car08g00267 241 MobiDBLite consensus disorder prediction 191 205 - -
Car08g00267 241 MobiDBLite consensus disorder prediction 167 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00267 Car-Chr8 2131486 2133216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00267 15 241 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 66.109 2.03e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00267 - - gmx:100781436 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00267 08 2131486 2133216 Car08g00267 08 2131486 2133216 ECH