Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00261 ATGAGAATACATCATCAAATTCATCTTTCTCATGCTCTATTCTGCACCATTCTCTGTTTGCTTTGGTCTATTACCACTGTCTCACCAATAACTGAGAAAGAGATTTTACTTCAATTCAAGGGTAACATCACAGAAGATCCATACAACAGTTTGAGTTCATGGGTTTCTAGTGAAGACCCATGTCAAGGTTTCAAAGGTATTTTCTGTAACTCTGAAGGGTTTGTTGAAAGAATCGTGCTTTGGAACACAAGCTTGGGTGGAGTGTTGTCACCATCACTCTCTGGTTTGAAGAGGTTGAGGATATTGACATTGTTTGGGAATCGATTCTCAGGTAATATTCCAGAAGGTTATGCTGATCTTCACTCCTTGTGGAAGATCAATTTCAGCTCCAATGCTTTAACTGGTTCGATTCCTGAATTCATTGGTGATTTGCTTAACATTCGGTTTCTAGATTTGTCAAAGAATGGTTTCAATGGAGAGATACCTTCTGCTTTGTTTAGGTACTGTTATAAAACCAAGTTTGTTTCCCTTTCTCATAACAATCTTGTTGGTTCAATTCCTGTATCTTTAGTGAATTGTTCCAATCTTGAAGGCTTTGATTTTTCTTTCAATAATCTAAGTGGTTTTGTCCCTTCTAGAATATGTGACATTTCCATGTTATCATATGTATCATTGAGAAGCAATGCCTTATCAGGTAGTGTGAGAGAGCAAATTTCTGCATGCAAGAGTCTAATGCATTTGGATTTTGGTAGTAATAGGTTTACTGATTTGGCTCCATTCAGCATCCTTGGAATGCAAAATCTTACTTATTTTAATATATCCTATAATGGGTTTGAAGGAAAAATTCCGGATATCACTGTATGTAGTGAGAGATTAGAGATCTTTGATGCTTCAGGGAATGATTTGGATGGGGAGATTCCCTCCAGCATAACTAGATGCAAGAATCTTAAGCTCTTGTCATTGGAGTTGAATAGGTTGAAAGGGAGTATCCCAGTTGATATTCGGGAATTGCGAGGACTATTGGTTATCAAATTGGGTATTAACTTGATAGGAGGAATGATTCCCAAGGGGTTTGGCGACATTGAGCTGCTTGAATTGCTGGATTTGCACAACCTAAACCTTGTTGGTGAAATTCCGGACGATATAACTAATTGCAAGTTTCTTCTTGAGCTGGATGTGTCTGGTAATAACTTAGAGGGTGAGGTTCCGCTGGCTATTTACAATATGACAAATCTGGAAGCCCTTGACCTACATCATAACCAGCTTAAGGGAAGCATCCCATCAAGCTTAGGAAATCTATCGAGGATCCAATACTTAGATCTATCGCATAATTTGTTTTCTGGTTCAATCCCTGCTTCCCTTGGAGATTTAAAAAGTTTGAAACATTTTAATCTCTCATTCAACAATCTCTCTGGTGTCATTCCTGATATTGCAACCATACAGCATTTTGGTGCACCTGCATTTTCCAATAATCCTTTTCTCTGTGGTGCTCCTTTGGACACTCCTTGCTCAGAAAATGGAACTAGATTGTCACCTTCGCCTCCTGGGAAAACTAAACTTCTCACCGTCTCTGCAATTGTTGCCATTGTTGCTGCAGCTGTTATTCTTGCCGGGGTTTGTTTGGTTACCATCGTGAGTATTAGGGCCCGGCGTAGAAAAAGAGACGATGATCAGATTATGATTGTTGAGAGTACCCCTCTAGGATCAACAGAATCAAATGTTATAATTGGAAAGCTGGTTCTCTTCAGCAAAAGTTTGCCATCAAAATATGAAGATTGGGAGGCAGGCACAAAAGCATTGCTTGACAAAGAGTCTTTGATAGGTGGCGGATCAATCGGTACAGTCTACAGAACCGACTTTGAAGGTGGCATCTCAATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGGATCAGAAATCAAGAGGAATTTGAACACGAAATTGGGCGACTAGGCAACATTCGACACCATAATTTAGTTACCTTTCAAGGTTACTACTGGTCCTCTTCAATGCAGTTGATTTTATCAGAGTTTGTTTCAAATGGGAATCTCTATGATAATCTACATGGGCTTGGCTATCCCGGAACCAGCACCAGTAGAGGCAATAGGAAATTAGATTGGTCTAGAAGGTTCCAAATTGCGCTCGGAACTGCAAGAGCCCTTGCATATCTCCACCACGACTGTAGACCTCCAATCCTTCACCTCAACCTTAAATCCTCTAACATACTCTTAGACGACAAGTACGAAGCCAAGTTATCTGATTATGGATTAGGAAAGTTGCTACCAATTTTGGATAATTACGGTCTGACCAAGTTCCACAATGCTGTTGGGTATGTTGCGCCAGAGTTGGCTCAAAGCTTTAGGCAGAGTGAAAAGTGTGATGTTTACAGTTTTGGGGTCATTCTTTTGGAGCTTGTTACAGGGAGAAAGCCTGTGGAAAGTCCAACCACAAATGAGGTTGTGGTTTTGTGTGAATATGTAAGAGGTTTGTTGGAGACTGGCTCGGCTTCAAATTGCTTTGACAGGAATTTACTTGGCTTTGCTGAGAATGAATTAATTCAGGTTATGAAATTGGGGCTAATTTGTACTTCAGAGGATCCTTTAAGGAGACCAAGCATGGCTGAGATTGTTCAGGTTCTTGAGTCCATCAGAAATGGATTGGAATCTCATTAA 2670 0.4011 MRIHHQIHLSHALFCTILCLLWSITTVSPITEKEILLQFKGNITEDPYNSLSSWVSSEDPCQGFKGIFCNSEGFVERIVLWNTSLGGVLSPSLSGLKRLRILTLFGNRFSGNIPEGYADLHSLWKINFSSNALTGSIPEFIGDLLNIRFLDLSKNGFNGEIPSALFRYCYKTKFVSLSHNNLVGSIPVSLVNCSNLEGFDFSFNNLSGFVPSRICDISMLSYVSLRSNALSGSVREQISACKSLMHLDFGSNRFTDLAPFSILGMQNLTYFNISYNGFEGKIPDITVCSERLEIFDASGNDLDGEIPSSITRCKNLKLLSLELNRLKGSIPVDIRELRGLLVIKLGINLIGGMIPKGFGDIELLELLDLHNLNLVGEIPDDITNCKFLLELDVSGNNLEGEVPLAIYNMTNLEALDLHHNQLKGSIPSSLGNLSRIQYLDLSHNLFSGSIPASLGDLKSLKHFNLSFNNLSGVIPDIATIQHFGAPAFSNNPFLCGAPLDTPCSENGTRLSPSPPGKTKLLTVSAIVAIVAAAVILAGVCLVTIVSIRARRRKRDDDQIMIVESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGGGSIGTVYRTDFEGGISIAVKKLETLGRIRNQEEFEHEIGRLGNIRHHNLVTFQGYYWSSSMQLILSEFVSNGNLYDNLHGLGYPGTSTSRGNRKLDWSRRFQIALGTARALAYLHHDCRPPILHLNLKSSNILLDDKYEAKLSDYGLGKLLPILDNYGLTKFHNAVGYVAPELAQSFRQSEKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRGLLETGSASNCFDRNLLGFAENELIQVMKLGLICTSEDPLRRPSMAEIVQVLESIRNGLESH 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00261 889 ProSiteProfiles Protein kinase domain profile. 601 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00261 889 Gene3D Phosphorylase Kinase; domain 1 571 677 - -
Car08g00261 889 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Car08g00261 889 PANTHER - 12 888 - -
Car08g00261 889 SUPERFAMILY Protein kinase-like (PK-like) 602 880 IPR011009 -
Car08g00261 889 Pfam Protein kinase domain 603 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00261 889 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Car08g00261 889 PANTHER UNNAMED PRODUCT 12 888 - -
Car08g00261 889 Gene3D Transferase(Phosphotransferase) domain 1 678 888 - -
Car08g00261 889 ProSiteProfiles Leucine-rich repeat profile. 411 434 IPR001611 GO:0005515
Car08g00261 889 SUPERFAMILY L domain-like 76 211 - -
Car08g00261 889 SUPERFAMILY L domain-like 169 495 - -
Car08g00261 889 Gene3D Ribonuclease Inhibitor 166 510 IPR032675 -
Car08g00261 889 Gene3D Ribonuclease Inhibitor 31 146 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00261 Car-Chr8 2090604 2093364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00261 1 888 Receptor kinase-like Gene Family AT1G62950 64.660 0.0 1121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Car08g00261 Pkinase 1.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00261 - - mtr:MTR_5g011410 1558.89