Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00257 atgcaagagcttccaaatgaagacgtttttcatggaacacacactgctgctgaggctgcaggaagattcgtcgaagatgcaagtgtttttgggaatgctggaggtgtagcagctggtatggcacctaatgctcacatagcAATTTACAAAGTTTGTACTATAATAGATGAAATTGGTTGCCCTGAAAGTGCTATTTTAGCTGCAATGGATATGGCTATTGAAGATGGTGTAGATGTTCTTTCTCTTTCACTTGGTTTAGGATCTCTTCCATTTTTTGAAGACTCAATTGCAATTGGTGCATTTGCAGCCACTCAAAATGGAATCTTTGTCAGTTGTTCAGCTGGAAATTCTGGCCCTGATTACAGCACTCTCTCAAATGAAGCTCCATGGATCCTCACCGTCGGTGCAAGCACAATTGACAGAAAAATAGTAGCATCAGCAAAGCTAGGAGATGGAGAGGAATATGAAGGTGAAACACTTTTCCAACCCAAGGACTTTTCTCAACAATTATTTCCACTTGTTTATGCAGGTTCATACGGAAACTCAAACCAGTCAGAGACACAAACTAGTGATCAGTCCTTGTGTTTTCCAGGATCCTTAAAAAACGTTGATCTAAGAGGAAAAGTAGTGTTATGTGACGCAGGTGGAGGTATACCAAGTGATTTAAAAGGACAAGAAGTTCTAAATTCAGGTGGTGTAGCAATGATCCTTGCAAATCCAGAAGAACTTGGTGTCAGCACTTTTGCTACTCCTAATGTTCTACCAGCTGTTGAAGTGAGTTATGCAGCTGGTTTATCAatcaaatcttacataaacttaaccaacacaccaacatcaacatTGTTATTCAAAGGAACAGTAATCGGCGATTCACTTGCACCTTCTGTTGTTACATTTTCTTCTAGAGGTCCAAACCAAGAAAGTCCCGGAATTCTAAAACCAGACATCATAGGACCTGGTGTCAACATTTTAGCAGCATGGGGTATCTCAGTAGACAACAAAATTCCACCATAcaacattgtttccggaacttcaatgtcttgtccgcacctaagtggaattgctgcattgctcaaaagttctcaccctgattggtctccggctgctataaaatcggcaatcatgacaacTGCTACTACAAAAAACCTTGCTGGTTTACCTATAATGGATCAAAGGCTTTTACCTGCCGATGTTTTTGCAACTGGTGCGGGACATGTTAACCCTGTTAAAGCAAATGATCCAGGTCTTGTTTATGATATAAAACCAGAAGATTATGTTTCTTATTTGTGTGGTTTGGGTTATTCTGATAAAGAAATTGAAATTATTATACAGTGGAAAGTGAATTGTTTTGATGTGAAAAGTATAGCAGAAGCAGAACTTAATTATCCTTCATTTTCTATTCGGTTGGGTTCTGATTCACAGTTTTATACAAGAACTTTGACTAATGTTGGACCTGTGAATTCAACTTATAGAGTGAAAATTGAGGAGCCTTTGGCTTTGGGAATGAGTGTAAATCCTACTGAAATAACATTTAGTGAAGTGAACCAGAAGGTTAGTTACTCAGTGGATTTTATACCACAAGGTAAAGAAAATAGAGGGAACGCTACTTTTGCTCAGGGTTCTATCACTTGGGTATCTGATAAACATGCTGTTAGAGTCCCCATATCTGTTATTTTCAAGTGA 1683 0.3131 MQELPNEDVFHGTHTAAEAAGRFVEDASVFGNAGGVAAGMAPNAHIAIYKVCTIIDEIGCPESAILAAMDMAIEDGVDVLSLSLGLGSLPFFEDSIAIGAFAATQNGIFVSCSAGNSGPDYSTLSNEAPWILTVGASTIDRKIVASAKLGDGEEYEGETLFQPKDFSQQLFPLVYAGSYGNSNQSETQTSDQSLCFPGSLKNVDLRGKVVLCDAGGGIPSDLKGQEVLNSGGVAMILANPEELGVSTFATPNVLPAVEVSYAAGLSIKSYINLTNTPTSTLLFKGTVIGDSLAPSVVTFSSRGPNQESPGILKPDIIGPGVNILAAWGISVDNKIPPYNIVSGTSMSCPHLSGIAALLKSSHPDWSPAAIKSAIMTTATTKNLAGLPIMDQRLLPADVFATGAGHVNPVKANDPGLVYDIKPEDYVSYLCGLGYSDKEIEIIIQWKVNCFDVKSIAEAELNYPSFSIRLGSDSQFYTRTLTNVGPVNSTYRVKIEEPLALGMSVNPTEITFSEVNQKVSYSVDFIPQGKENRGNATFAQGSITWVSDKHAVRVPISVIFK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00257 560 Gene3D - 140 289 - -
Car08g00257 560 CDD PA_subtilisin_like 148 281 - -
Car08g00257 560 Gene3D Peptidase S8/S53 domain 7 425 IPR036852 GO:0004252|GO:0006508
Car08g00257 560 Pfam Fibronectin type-III domain 459 557 IPR041469 -
Car08g00257 560 ProSiteProfiles Serine proteases, subtilase domain profile. 1 412 - -
Car08g00257 560 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 3 559 - -
Car08g00257 560 PRINTS Subtilisin serine protease family (S8) signature 7 20 IPR015500 -
Car08g00257 560 PRINTS Subtilisin serine protease family (S8) signature 342 358 IPR015500 -
Car08g00257 560 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 559 IPR045051 -
Car08g00257 560 SUPERFAMILY Subtilisin-like 5 416 IPR036852 GO:0004252|GO:0006508
Car08g00257 560 Pfam Subtilase family 10 382 IPR000209 GO:0006508|GO:0008236
Car08g00257 560 Pfam PA domain 172 266 IPR003137 -
Car08g00257 560 Gene3D - 429 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00257 Car-Chr8 2069706 2071388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00257 5 557 Subtilisin-like Serine Gene Family AT5G67360 46.454 3.57e-157 466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00257 08 2069706 2071388 Car08g00257 08 2069706 2071388 ECH
Car07g01182 07 10608959 10611500 Car08g00257 08 2069706 2071388 PCT