Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00256 atggcaccagatgcacatttggcAATCTACAAAGTATGCAGCATCAAAGGTTGTACTGAAAGTTCAATAATAGCTGGAATGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCCTTGGAGGACCTTCCACTCCTTTCTTTGAAGATGGAATTGCACTTGGTGCATTTAGTGCAATTCAAAAGGGAATTTTTGTTTCTTGTTCAGCTGCGAATTCAGGTCCTGAATACGGTACACTGTCTAATGAAGCACCATGGATTCTAACTGTTGGTGCAAGCACAATTGACAGAAAAATAGAAGCAATAGCTAAGCTTGGAAATGGGATAGAATATCTTGGAGAATCAGTTTTTCAACCAAAAGACTTTGAATCAACATTATTGCCACTTGTGTATGCAGGTGCAATTAACACAAGTGATGATTCCATTGCCTTTTGTGACCCTATATCAATGAAGAATGTTGATGTTAAGGGAAAAGTAGTTTTATGTGAGCAAGGCGGATTTGTTTCAAGAGTGGCAAAAGGTCAAGCAGTTAAAGATGCTGGTGGTTCTGCCATGATCCTCGTGAACAGCGAACGTGAAGCTTTCAATCCAATTACTGATGTTCATGTTCTACCTGCTGTTCATGTAAGTTACTCTTCTGGTTTATCAATCAAAGATTACATAAACTCAACTTCAACACCAGAAGCCACAATTTTGTTCCAAGGAACTGTTATTGGAAATCCATTAGCTCCTCAAGTTGCTTCGTTTTCTTCAAGAGGGCCAAGCAAATCAAGCCCCGGAATTCTGAAACCGGATATAATTGGACCTGGAATGAACATTCTGGCAGGATGGTATGTATCATTAGACAACAGTACACCGCCGTTTAACATAGTTTCAGGTACCTCAATGTCCTGTCCTCACCTCGGTGGCATTGCGGCTCTGTTGAAAAACTCTCATCCAGATTGGTCACCGGCCGCTATAAAGTCGGCAATCATGACAACTGCAAATGTGGTTAATCTTCAAGGAACGGCTATTTTAGACCAAAGGCATCTACCAGCTGATGTATTTGCAACTGGTGCTGGACATGTCAACCCTTTGAAAGCAAATGATCCAGGACTTGTTTATGATATTGAACCAAATGATTATGTTCCTTATTTGTGTGGTTTGAATTATACTGATAGACAAGTTGGTGTTATTTTGCAACAGAAAGTGAAATGCTCTGATGTAAAGAGCATATCACAGGCACAACTTAATTATCCATCGTTTTCGATTCGGTTGGGGTCCACTTCGCAGTTTTATACTAGAACATTGACAAATGTTGGACCTGTTAACACAACTTACAGTGTCGAAATTGATGTGCCTTTGGCTGTGGGTATGAGTGTAAGCCCTGCTCAAATAACATTCACTGAGGTGAAGCAAAAGGTTACATATTGGGTTGATTTTATACCTGAAGATAAAAAGAATAGAGGTGATAACATGATTGCTCAGGGGTCTATCAAGTGGGTTTCTGAAAAGTATTCTGTTAGCATTCCTATAGCTATTGTCTTTGTGTGA 1683 0.35 MAPDAHLAIYKVCSIKGCTESSIIAGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGGPSTPFFEDGIALGAFSAIQKGIFVSCSAANSGPEYGTLSNEAPWILTVGASTIDRKIEAIAKLGNGIEYLGESVFQPKDFESTLLPLVYAGAINTSDDSIAFCDPISMKNVDVKGKVVLCEQGGFVSRVAKGQAVKDAGGSAMILVNSEREAFNPITDVHVLPAVHVSYSSGLSIKDYINSTSTPEATILFQGTVIGNPLAPQVASFSSRGPSKSSPGILKPDIIGPGMNILAGWYVSLDNSTPPFNIVSGTSMSCPHLGGIAALLKNSHPDWSPAAIKSAIMTTANVVNLQGTAILDQRHLPADVFATGAGHVNPLKANDPGLVYDIEPNDYVPYLCGLNYTDRQVGVILQQKVKCSDVKSISQAQLNYPSFSIRLGSTSQFYTRTLTNVGPVNTTYSVEIDVPLAVGMSVSPAQITFTEVKQKVTYWVDFIPEDKKNRGDNMIAQGSIKWVSEKYSVSIPIAIVFV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00256 560 CDD PA_subtilisin_like 154 281 - -
Car08g00256 560 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 29 IPR045051 -
Car08g00256 560 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 88 559 IPR045051 -
Car08g00256 560 SUPERFAMILY PA domain 178 300 IPR046450 -
Car08g00256 560 Pfam PA domain 178 266 IPR003137 -
Car08g00256 560 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 1 29 - -
Car08g00256 560 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 88 559 - -
Car08g00256 560 Gene3D - 146 288 - -
Car08g00256 560 Pfam Fibronectin type-III domain 459 557 IPR041469 -
Car08g00256 560 ProSiteProfiles Serine proteases, subtilase domain profile. 1 412 - -
Car08g00256 560 SUPERFAMILY Subtilisin-like 1 416 IPR036852 GO:0004252|GO:0006508
Car08g00256 560 Pfam Subtilase family 102 381 IPR000209 GO:0006508|GO:0008236
Car08g00256 560 Gene3D Peptidase S8/S53 domain 89 425 IPR036852 GO:0004252|GO:0006508
Car08g00256 560 Coils Coil 27 28 - -
Car08g00256 560 Gene3D - 429 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00256 Car-Chr8 2065571 2067253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00256 89 546 Subtilisin-like Serine Gene Family AT1G04110 43.856 1.13e-127 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00256 - - gmx:100799902 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00256 08 2065571 2067253 Car08g00256 08 2065571 2067253 ECH