Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00253 ATGGCTAGCAAATTATTATCATCATTCACATTAACATGCCCACGTCCATCCATAGTACCATCTCCAACATTCTCTTCCTTATCTTCCACTTTTACAAGAATCCATCTTATTCAATTCAATGCCGGCGGCGGCGGCGGCCGTTACTCTCGCCTTCGCCGCCGACTATTTCTGTTTTCCACCAAGGCCACCTCTGATCAACAAAGTCAAGAAGATGGTGTTATTGATAGTAAAATCTTACAATATTGCAGCATAGACAAAAAAGAGAAGAAATCAGTTGGTGAACTTGAGCAAGATTTTCTTCAAGCACTTCAAGCATTTTACTATGAGGGAAAGGCTATTATGTCAAATGAAGAATTTGATAATCTCAAGGAAGAACTCATGTGGGAAGGAAGCAGTGTTGTAATGCTAAGTTCTGCTGAGCAAAAATTTCTGGAAGCGTCTATTGCTTATGTGTCTGGAAAACCAATCATGAGTGATAAAGAGTTTGATCAATTGAAAATGAAGCTAAAGATGGAAGGGAGTGAAATTGTGGCTGAGGGTCCTCGGTGCAGTCTTCGTAGTAGAAAGGTTTACAGTGACTTGACTGTTGACTATTTAAAGGCATTGCTGCTGAACGTTCCAGCAACTGTGCTTGCATTAGGATTGTTCTTCTTCCTTGATGATATCACTGGATTTGAGGTCTCTTATTTCATTGAGATTCCAGAACCTTTCAGTTTCATTTTGACTTGGTTTGCTGCTGTTCCCTTCATTCTGTGGTTTGCTCAATCAATTACAAATGCAATTATAAAAGATTTTTTGATTTTGAAGGGCCCCTGTCCTAATTGTGGTACTGAAAACACCTCATTCTTTGGGACTATATTGTCAATTTCAAGTGGCAATTCCACCAACACTGTCAAATGTGAAAACTGTGGAACTGTGATGGTATATGATTCAACTACAAGATTGATTACATTACCAGAATGA 963 0.3904 MASKLLSSFTLTCPRPSIVPSPTFSSLSSTFTRIHLIQFNAGGGGGRYSRLRRRLFLFSTKATSDQQSQEDGVIDSKILQYCSIDKKEKKSVGELEQDFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSAEQKFLEASIAYVSGKPIMSDKEFDQLKMKLKMEGSEIVAEGPRCSLRSRKVYSDLTVDYLKALLLNVPATVLALGLFFFLDDITGFEVSYFIEIPEPFSFILTWFAAVPFILWFAQSITNAIIKDFLILKGPCPNCGTENTSFFGTILSISSGNSTNTVKCENCGTVMVYDSTTRLITLPE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00253 320 PANTHER PGR5-LIKE PROTEIN 1A 1 320 - -
Car08g00253 320 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 1 320 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00253 Car-Chr8 2054440 2056414 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00253 - - gmx:100785186 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00253 08 2054440 2056414 Car08g00253 08 2054440 2056414 ECH
Car07g01181 07 10595872 10602953 Car08g00253 08 2054440 2056414 PCT