Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00247 ATGCTTAACATAACAACTCACTCTTACATTTCATTCATCTTTCAAAAACCTTATACTCTTTTCTACAACATTTCTAAACAACACTTTGTTACTTATTCTTACAACATTATTATGGCTCATTTGGTTTATGGTGAAACTCCATCTTTTGGAAACTCACACCATGGACAAGGTCAACAACTTGTTCCATTTCCAACAACTTCAACTTCCTTAAGGATTCTAATCTTACATGGAAACTTACAAATTTTCATCCAAGAGGCCAAAAACCTTCCCAACATGGACACTTTTCACAAGAAAATAGGTGACATGTTTTCGATGTTACCAAGAAAACTTGGTGGCAAAATTGAAGGACACATAACTCGTAATCTAACCAGTGATCCATATTATTTTAATGTCCCTGTTGCACACTTTGCATCAGAAATTCATTTTGTTGTAAAAGACAATGATGTTGTTGGTTCACAGATTATTGGTGCTGTTGGAATTCCAGTTGAAAAAATATGTAATGGTGATAAAGTTGAAGGCTTTTTCCCCCTCCTTAATGCTAGTGGAAAACCCTTTAAGACTGAAACTGTGTTAAGCTTATCAATTCAATATACTCCTGTTGATAAGGTGACCCTTTATAGAAATGGGGTTGGTTCTGATTTTCAAGGTGTTCCTGCTACATATTTTCCTCTTAGAAAAGGTGGAAAAGTTACACTTTATCAAGATTGTCATGTTCCACAAGGTTGTCTTCTTACTTTGAAAGTTGATGGTGGTGATGATGTGAGTAGTTATGAGCATGGAAATTGTTGGCATGATATCTTTGATGCAATAAGTGAGGCGCGTCGATTAGTTTATATCGTTGGTTGGTCTGTGTACTACAATGTTAGTCTCATTAGGGATGATAGAGATGGAAAAGATTGTAGTTTAGGTGATGTTCGTAAAGCTAAATCACAAGAAGGTGTGAGAGTGCTTCTACTTGTTTGGGATGATCCTACTTCTAAAAGCATGCTTGGACATAAAACGGTTGGACTAATGAACACTCATGATGAGGACACTCACCATTTTTTCAAGCATTCTTCAGTTAGAGTGCTTCTTTGCCGAAGATCTGGAGGAAAAGGACATAGCTGGGTCAAACAGCAGGAAGCTGGAACAATCTATACACATCATCAGAAGACAGTGATTGTGGATGCTGATGCAGATGAGAATAAAAGAAAGATTGTAGCTTTCATCGGAGGTCTTGATTTATGTGTGGGAAGATATGATATCCAACACATTCTCTCTTTAGGACTTTGCAAACAACACACAAAGATGACTTTCATAATCCTAACTTTGAGGTTGGGGTCTGTTACTGGTCTTCCAAGACAACCATGGCATGATTTGCATTCCAAAATTGATGGTCCTGCTGCATATGACATCCTCACCAATTTCAAGGAACGTTGGTTAAGAGCGTTAAAAATGACTAGTCTTCAAAAGATGAAAACTTCACATGATGATTCATTACTGAAAATCGATAGAATCTCGATCATTGTAGGCATTGATGAAGTTGCTTGCCTAAATGAACATAACAATGAGACTTGGCATGTTCAGATCTTATGTTTGATCGATTCCAATTCTGTGAAAGGATTTCCAAAAGAACCGAAAGACGCTAAACAAATGAACTTGGTTTGTGGAAAAAATCCAACAAAATCTAAACCTCATGGACAGGTGCATGGTTATAGAATGTCACTATGGAGTGAGCACATAGGAAGTGTGGAAGAATGTTTTGTGGAAGCAGAGAGTGTTGAATGTGTGAGAAGGATAAGGTCATTGAGTGAGTATAACTGGAGACAATACGTGGCTGATGAGGTAACTGAGATGAAAAGCCATTTACTGAAATACCCTCTTGAGGTTGATTCAAAGGGCAATGTCAAGCCTCTTTTTGGGTGTGAGACTTTCCCGGATGTTGGTGGAAACATAAAGGGTACTTTTACTGTACTTCAAGAAAATCTCACCGTCTGA 1977 0.3758 MLNITTHSYISFIFQKPYTLFYNISKQHFVTYSYNIIMAHLVYGETPSFGNSHHGQGQQLVPFPTTSTSLRILILHGNLQIFIQEAKNLPNMDTFHKKIGDMFSMLPRKLGGKIEGHITRNLTSDPYYFNVPVAHFASEIHFVVKDNDVVGSQIIGAVGIPVEKICNGDKVEGFFPLLNASGKPFKTETVLSLSIQYTPVDKVTLYRNGVGSDFQGVPATYFPLRKGGKVTLYQDCHVPQGCLLTLKVDGGDDVSSYEHGNCWHDIFDAISEARRLVYIVGWSVYYNVSLIRDDRDGKDCSLGDVRKAKSQEGVRVLLLVWDDPTSKSMLGHKTVGLMNTHDEDTHHFFKHSSVRVLLCRRSGGKGHSWVKQQEAGTIYTHHQKTVIVDADADENKRKIVAFIGGLDLCVGRYDIQHILSLGLCKQHTKMTFIILTLRLGSVTGLPRQPWHDLHSKIDGPAAYDILTNFKERWLRALKMTSLQKMKTSHDDSLLKIDRISIIVGIDEVACLNEHNNETWHVQILCLIDSNSVKGFPKEPKDAKQMNLVCGKNPTKSKPHGQVHGYRMSLWSEHIGSVEECFVEAESVECVRRIRSLSEYNWRQYVADEVTEMKSHLLKYPLEVDSKGNVKPLFGCETFPDVGGNIKGTFTVLQENLTV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00247 658 SUPERFAMILY Phospholipase D/nuclease 213 478 - -
Car08g00247 658 Gene3D Endonuclease Chain A 250 497 - -
Car08g00247 658 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 70 200 IPR035892 -
Car08g00247 658 Coils Coil 652 658 - -
Car08g00247 658 Gene3D C2 domain 75 205 IPR035892 -
Car08g00247 658 Pfam Phospholipase D C terminal 578 648 IPR024632 -
Car08g00247 658 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 377 412 IPR001736 GO:0003824
Car08g00247 658 Pfam Phospholipase D Active site motif 378 412 IPR001736 GO:0003824
Car08g00247 658 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 44 127 - -
Car08g00247 658 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 128 552 - -
Car08g00247 658 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 555 657 - -
Car08g00247 658 PANTHER PHOSPHOLIPASE D 44 127 IPR015679 -
Car08g00247 658 PANTHER PHOSPHOLIPASE D 128 552 IPR015679 -
Car08g00247 658 PANTHER PHOSPHOLIPASE D 555 657 IPR015679 -
Car08g00247 658 Pfam C2 domain 77 177 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00247 Car-Chr8 2003638 2006916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00247 556 658 Phospholipase D Gene Family (Wang group) AT2G42010 60.194 6.00e-40 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00247 K01115 - gmx:100786241 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00247 08 2003638 2006916 Car08g00247 08 2003638 2006916 ECH