Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00238 ATGTGGGTTCTATGTCTTGGGGCATTGGTTATTATATGCATTACACATTGGGTTTATAGATGGAGAAATCCTAGTTGCAATGGTAAACTACCACCAGGTTCAATGGGTTTTCCCCTTCTGGGTGAGACCCTCCAGTTCTTCTCCCCCAACACTTCTTGTGATATTCCTCCATTCATCAAGCAGAGAATGAAAAGGTATGGACCAATCTTCAAGACCAGCTTGGTTGGAAGACCAGTTGTGGTGTCCACAGACCCTGATCTTAATTACTTCATATTCCAACAGGAAGGGAAAATATTCCAGAGCTGGTACCCAGATACATTCACAGAGATATTTGGGAAACAAAATGTAGGTTCCTTACATGGGTTTATGTATAAGTACCTTAAGAACATGGTGCTCAATTTGTTTGGTCCTGAAAGCCTTAAAAAGATGCTATCAGAGGTTGAAGAGGCAGCCTGCACAACATTACAACAATTGTCTTGTCAGGAGAACTGTGTTGAGCTGAAGGAAGCAACGGCAAGGATGATATTTGATTTGACCGCAAAAAAACTCATCAGTTATGATTCAACCAAGTCCTCAGAGAATTTAAGGGAGAACTTTGTTGCATTTATACAAGGACTAATCTCATTCCCTTTGGACGTTCCAGGAACAGCTTATCACAAATGTTTGCAGGGTAGGAAAAGGGCAATGAAGATGCTGAAGAACATGCTGCAAGAAAGAAGGGAAATGCCTAGGAAACAACAGAAGGATTTCTTTGACTATGTTATTGAAGAACTTAGGAAAGAAGGAACACTCCTAACTGAAGCAATCGCTCTGGACCTCATGTTTGTTCTCCTCTTTGCAAGCTTTGAAACCACTTCTCTGGCTCTTACTTATGCCATCAAATTACTCTCTGACAATCCCTCAGTGCTCAACCAATTACAAGAAGAAAATGAAGCCATCCTCAAACGACGTAAAAATCCTAACTCCGGAGTAACGTGGCAAGAATACAAATCAATGACATTTACATTTCAGCTCATAACTGAAACCGCCAGACTCGCAAATATAGTTCCAGGAATCTTCCGGAAGGCATTAAGGGAAGTTAATTTTAAGGGGTATACCATACCAGCAGGGTGGGCAATCATGGTGTGTCCCCCAGCTGTACATTTGAACCCAGCGAAATATCAGGACCCTCTTGCTTTCAACCCATCTAGATGGGAGGGAATGGAACTGAATGGTGCCACCAAACATTTCATGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGGACAGACTTCGCTAAGGTTCAGATGGCTGTTTTTCTTCATAGCTTGGTCACAAAGTATAGGTGGCAACCTATCAAAGGAGGGAATATTGTTCGAACTCCTGGTTTACAGTTTCCAAATGGATTTCACGTCCAGATCACAAAGAAAGATCAAACTCATCAAAGGAAGCATGAACCAGAATATACAACTACAAATTAG 1461 0.4175 MWVLCLGALVIICITHWVYRWRNPSCNGKLPPGSMGFPLLGETLQFFSPNTSCDIPPFIKQRMKRYGPIFKTSLVGRPVVVSTDPDLNYFIFQQEGKIFQSWYPDTFTEIFGKQNVGSLHGFMYKYLKNMVLNLFGPESLKKMLSEVEEAACTTLQQLSCQENCVELKEATARMIFDLTAKKLISYDSTKSSENLRENFVAFIQGLISFPLDVPGTAYHKCLQGRKRAMKMLKNMLQERREMPRKQQKDFFDYVIEELRKEGTLLTEAIALDLMFVLLFASFETTSLALTYAIKLLSDNPSVLNQLQEENEAILKRRKNPNSGVTWQEYKSMTFTFQLITETARLANIVPGIFRKALREVNFKGYTIPAGWAIMVCPPAVHLNPAKYQDPLAFNPSRWEGMELNGATKHFMAFGGGMRFCVGTDFAKVQMAVFLHSLVTKYRWQPIKGGNIVRTPGLQFPNGFHVQITKKDQTHQRKHEPEYTTTN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00238 486 PANTHER CYTOCHROME P450 26 8 468 - -
Car08g00238 486 Pfam Cytochrome P450 31 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Car08g00238 486 SUPERFAMILY Cytochrome P450 24 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 8 468 - -
Car08g00238 486 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00238 486 Gene3D Cytochrome P450 22 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00238 Car-Chr8 1895598 1899014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00238 1 470 Cytochrome P450 AT1G12740 74.843 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00238 - - gmx:100812089 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00238 08 1895598 1899014 Car07g01531 07 15093866 15099135 PCT