Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00209 ATGGGTAGCAAAAGCAAAGATACAGAGGGAGATCCAATAAAGAAGGTTTTGACTCACAGAGGTCGATATGTCCAGTACAATTTGTATGGAAACTTATTCGAACTTTCCTGCAAATACGTTCCTCCTCTTCGCCCTATCGGTAGAGGCGCTTATGGCATCGTCTGTACTGCTGTTAATTCCGATACACATGAGGAAGTTGCCATCAAGAAGATTGCCAATACATTTGACAATATTATTGATGCTAAAAGGACTTTGAGAGAAATTAAGCTCCTACGTCACATGGACCATGAAAATGTTATTGCTATAAAGGATATAATACGACCTCCACAAAAGGATGCTTTTAATGATGTTTACATAGTTTATGAATTGATGGACACTGATCTTCATCAGATTCTTCGTTCTGATCAACCTCTCAACCTTGACCATTGTCAGTACTTTCTATACCAGCTATTAAGAGGACTGAGGTATGTGCATTCAGCCAATGCCTTGCACCGTGATCTTAAACCAAGTAATTTACTTTTGAATGGAAATTGTGATCTTAAAATTGGGGATTTTGGTTTGGCGAGGACGACATCTGAAACGGATTTTATGACCGAGTATGTCGTTACTAGATGGTACCGAGCCCCGGAATTGCTCCTTAACTGTTCAGAGTACACCTCTGCTATTGATGTTTGGTCGGTTGGTTGCATATTTGCTGAAATTATGACCAGAAAAACCTTGTTTCCAGGGAAAGATTATGTTCATCAACTAAGGCTTATAACAGAGTTAATAGGTTCACCCGACGATTCTAGGCTTGAATTTCTCCGAAGTGAAAATGCGAGAAGGTATGTCAAACAACTTCCTCAATGCACGAAGCAAAATCTTTCGGCAAGATTTCCTCATATACCGCCCGAGCCTCTGGACCTACTAGAGAAAATGCTTATATTTGATCCTAACAAACGAATTACAGTTGAAGAGGCACTATGTCATCCTTATCTTTCATCTCTTCATGACATCAACGACGAGCCAGTTGCTCCAAGGCCATTCTGTTTTGATTTTGAGCAGCCAGCATGCACTGAAGAGCATATTAAGGAGCTCATCTGGATGGAATCGGTGAACTTCAATCCGGATCCACTCTCTCAATAA 1125 0.4053 MGSKSKDTEGDPIKKVLTHRGRYVQYNLYGNLFELSCKYVPPLRPIGRGAYGIVCTAVNSDTHEEVAIKKIANTFDNIIDAKRTLREIKLLRHMDHENVIAIKDIIRPPQKDAFNDVYIVYELMDTDLHQILRSDQPLNLDHCQYFLYQLLRGLRYVHSANALHRDLKPSNLLLNGNCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFAEIMTRKTLFPGKDYVHQLRLITELIGSPDDSRLEFLRSENARRYVKQLPQCTKQNLSARFPHIPPEPLDLLEKMLIFDPNKRITVEEALCHPYLSSLHDINDEPVAPRPFCFDFEQPACTEEHIKELIWMESVNFNPDPLSQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00209 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 373 - -
Car08g00209 374 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
Car08g00209 374 CDD STKc_TEY_MAPK 33 369 - -
Car08g00209 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 373 - -
Car08g00209 374 Pfam Protein kinase domain 44 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00209 374 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Car08g00209 374 Gene3D Phosphorylase Kinase; domain 1 23 363 - -
Car08g00209 374 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car08g00209 374 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00209 374 SMART serkin_6 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00209 374 SUPERFAMILY Protein kinase-like (PK-like) 43 334 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00209 Car-Chr8 1658597 1661667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00209 14 369 MAP Kinase Gene Family AT4G01370 80.337 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Car08g00209 Pkinase 1.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00209 - - gmx:100803024 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00209 08 1658597 1661667 Car08g00209 08 1658597 1661667 ECH
Car08g00209 08 1658597 1661667 Car06g00499 06 5032697 5035738 PCT